| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0907 |
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| Symbol | |
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| ID | 5410403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 887944 |
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| End bp | 888792 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640868133 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001404068 |
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| Protein GI | 154150450 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000565575 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAATCC CAGCAATTTA CCCTGCAATG ACTACACCGG CTCCCGCACC GCGGCCCGGA
CTGAAGTGGC TTTTGATCAT TATTGGCGGT CTGTTTCTCG TGATCGTGAT CTTCGGAGCC
GTGTATCTCC TCTCCGACAC CCAGCATGCC GGCGTAAAGG TCATCCGGAT GGAGGGAACG
CTTGATACCG GCGATTTTAT TGCCGACGAC AGCGTGGGAA GCGAATACGT GGGCAACCAG
CTGCGGGATG CCGCAGATGA TCCGATGGTA GACGCCATCG TGCTGCGCGT GGACAGCCCG
GGAGGTTCCC CGGCAGCAGC CGAGGAGATT ATCGGGGATC TCGAGTACGC AAAGACAAAG
AAACCGGTTG TGGTCTCCAT GGGGAGCATG GCCACTTCCG CGGCTTATTA TGTAAGCGCC
CATGCTAACG AGATCTATGC GGACCCCGAT ACCCTGACCG GTGCGGTCGG CGTTATCTGG
ACGTTCTCGG ATATCAGCGA CTGGATGAAA CAGGAAGGAT ACAACGTGAC GGTGGTCAAA
TCCGGGGACT TCAAGGATAT GGGGGCGGAT TCCCATGCGC TCACTCCTGC CGAACAGGCA
TATGCACAGC AGATCGTAAA TGAGAGTTTC CAGGAGTTCA TTAACGATGT AACCACGCAG
AGGATGATCG CAAAGTCAGA CATTGAGGAT GGTCGGGTGA TCCGGGGTGC CGATGCGATA
AAGATCAATC TGGTGGACAA ACTGGGCAAT CTTAACGATG CAATTGAGGG TGCACAGGAT
CTGGCCGATG CCCGCAGCCA GCAGTCTGCA AATCAGCTCC TCAGGCTACC GTTCTCCAAC
GCTTCCTGA
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| Protein sequence | MEIPAIYPAM TTPAPAPRPG LKWLLIIIGG LFLVIVIFGA VYLLSDTQHA GVKVIRMEGT
LDTGDFIADD SVGSEYVGNQ LRDAADDPMV DAIVLRVDSP GGSPAAAEEI IGDLEYAKTK
KPVVVSMGSM ATSAAYYVSA HANEIYADPD TLTGAVGVIW TFSDISDWMK QEGYNVTVVK
SGDFKDMGAD SHALTPAEQA YAQQIVNESF QEFINDVTTQ RMIAKSDIED GRVIRGADAI
KINLVDKLGN LNDAIEGAQD LADARSQQSA NQLLRLPFSN AS
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