Gene Mboo_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0878 
Symbol 
ID5410759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp856038 
End bp856448 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content54% 
IMG OID640868104 
Productmolydopterin dinucleotide-binding region 
Protein accessionYP_001404039 
Protein GI154150421 
COG category[C] Energy production and conversion 
COG ID[COG1153] Formylmethanofuran dehydrogenase subunit D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.385852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATA AGAAAATTAC GGTCAACATC ATTACATGCC GCACGATCCA GCAGGGCGTA 
GGCATGGAAG CAGGCAAGAC TTCCCAGAAG TACTTTGATG CCTGCACGAT CATCCAGATG
CACCCCGAGG ATTTCAAGAG ACTGGGTGCA TGGAGGAACA CGAATGTCAA GGTCACAAGC
TCGGTCGGGA GCGTTATTTT AAAGGCTGTC GAGACCCGTG AGGACCTTGT GCCGGGCCTT
GCCCACATAC CCATGGGCCC CTGGGCAAAC CGGATTGTCC CGGGATATAC CTTCTCCACG
GGAGAACCCT GCTTCAAGGG ATTCCCGGCG GATATAGAGA TTGCAGCAAA CGAGCGGATC
ATGGGAGCAG TCGAAGTACT GCAGGATGCC TGCGGACTTA TCAGGAAGTG A
 
Protein sequence
MANKKITVNI ITCRTIQQGV GMEAGKTSQK YFDACTIIQM HPEDFKRLGA WRNTNVKVTS 
SVGSVILKAV ETREDLVPGL AHIPMGPWAN RIVPGYTFST GEPCFKGFPA DIEIAANERI
MGAVEVLQDA CGLIRK