Gene Mboo_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0841 
Symbol 
ID5410030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp820202 
End bp820705 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content56% 
IMG OID640868066 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001404002 
Protein GI154150384 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.637586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGA TAGCAGATCT TCTTGTCAGG TACAAAGCCA TCGAATTTGG TGACTTTACC 
CTTGCTTCCG GTGCAAAGAG CCGTTACTAC GTGGATGTAA AGACCGCGGT CACGCATCCT
GAATTCCTCG CCGCAATCGC ACAGGAGATT GCCAAACGCT ATGAATTCGA TGTGGTTGCG
GGGGTAGCTG TCGGGGGAGT ACCGCTCGCG GTTGCAACGG CTCTTGCCGC AAAAAAGCCC
TTTGCCATAA TCAGGGCAGA GGAGAAGGAT CACGGCAAGA AGAACCCGAT CATCGGGGAA
GTGTCGGGAA AAAATGTCCT TCTCGTCGAG GACGTCACCA CATCGGGGGG ATCGGCCCTG
TACGGGATTG CCATGCTGCG TACCGCGGGT GCGCGGGCAG ACCGTGTGGT TACCGTAGTG
GACCGTGAGC AGGGTGCAGA GTCCTTGTTA AAAGAGCAGG ACGCTCATCT CATGGCCCTT
GTACGGGTCA GCGAGATCCT CTGA
 
Protein sequence
MNAIADLLVR YKAIEFGDFT LASGAKSRYY VDVKTAVTHP EFLAAIAQEI AKRYEFDVVA 
GVAVGGVPLA VATALAAKKP FAIIRAEEKD HGKKNPIIGE VSGKNVLLVE DVTTSGGSAL
YGIAMLRTAG ARADRVVTVV DREQGAESLL KEQDAHLMAL VRVSEIL