| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0836 |
|---|
| Symbol | |
|---|
| ID | 5410466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 814780 |
|---|
| End bp | 815991 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640868061 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_001403997 |
|---|
| Protein GI | 154150379 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.181964 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAG GAACTATCGT TCTTGCCTAT TCCGGGGGTC TTGATACCTC CATCTGCATC
CCGCTGTTAA AAGAGCGGTA CGATTACGAT CGTGTCGTAA CGGTTGCAGT CAATGTCGGA
CAAAGGGACG AGGAGATCGA TGTTGCCACA AAGAAAGGCA AAAAACTTGC CGACCGGCAC
TATACCATCG ATGTCCGGGA ACGCTTTGTC GCAGAACACA TCTTCCCGGC TATCAGGGCA
AACGGGTCGT ACGAGGGATA CCCTATGGGC ACCTCGCTTG CTCGGCCTTT AATCGCACAG
GAAGTAGTAA AGATCGCACA AAAGGAGAAG GCAACAGCGA TCGCCCACGG GTGCACGGGG
AAAGGAAATG ATCAGCTGCG CTTTGATTTC ATCATCCGTG CCGCCGGTTT TGAAGTCGTT
GCCCCCATCC GTGAGCAGAA CCTGACCCGC GACTGGGAGA TCGGATATGC AAAAGAGCAC
AATATCCCGG TCCCCGTGAA AAAGGACAAG CCCTGGAGCA TGGACGAGAA CTGCTGGAGC
AGGAGCATCG AGGGCGGAAG GCTCGAAGAG CCGGACTTCC ACCCGCCAGA AGAGATCTTC
CTCTGGACCG TCTCCCCTGA AAAGGCACCG GCGAAACCCG AGAAGATCAC CCTCACATTT
GCAAAGGGCG TCCCGGTGGC AATCAACGGG AAGAAGATGC CCGGCTATGA CCTGATCCAG
AAACTCAATG TCCTTGCCGG TAAGCACGGG ATTGGCAGGA ACGATATGAT CGAGGACCGG
ATCCTTGGCC TCAAGGCCCG GGAGAACTAC GAGCACCCGG CAGCGACTGT GATCCTGTTT
GCCCACCGCG ACCTTGAAGG GCTGGTCCTT ACCCGGTCCG AGCTCGCATT CAAGCGCATG
GTCGACGACA AGTGGTCGGA GCTTGCCTAC GAGGGTCTCG TGTACGAGCC TCTCTACGCG
GCGCTGAACG CATTTATCGA CACCACCCAG GAGCGGGTGA ACGGCTCTGT TGACCTTGAG
CTCTACAAAG GTGCAGTCCG GGTGCTGGGC CGCAGCTCCC CGCAGGCGAT CTACTCGGGC
GATCTTGTCT CCTTTGACAG CTCGTCCATT GACCAGTGCG ATGCGATCGG CGTCTCCCGG
TACTTCGGTC TCCAGGCCCG CATTGTCCAC GCGATGGGCG GGAAGAAGCC TGAAAAGGCC
GGCAGGAAAT AA
|
|---|
| Protein sequence | MGKGTIVLAY SGGLDTSICI PLLKERYDYD RVVTVAVNVG QRDEEIDVAT KKGKKLADRH
YTIDVRERFV AEHIFPAIRA NGSYEGYPMG TSLARPLIAQ EVVKIAQKEK ATAIAHGCTG
KGNDQLRFDF IIRAAGFEVV APIREQNLTR DWEIGYAKEH NIPVPVKKDK PWSMDENCWS
RSIEGGRLEE PDFHPPEEIF LWTVSPEKAP AKPEKITLTF AKGVPVAING KKMPGYDLIQ
KLNVLAGKHG IGRNDMIEDR ILGLKARENY EHPAATVILF AHRDLEGLVL TRSELAFKRM
VDDKWSELAY EGLVYEPLYA ALNAFIDTTQ ERVNGSVDLE LYKGAVRVLG RSSPQAIYSG
DLVSFDSSSI DQCDAIGVSR YFGLQARIVH AMGGKKPEKA GRK
|
|---|
| |