| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0821 |
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| Symbol | |
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| ID | 5411500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 796237 |
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| End bp | 798384 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640868046 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001403982 |
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| Protein GI | 154150364 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.99772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.688187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAC AGAGACCAGA TCCTGGAAAC AATCACTCGT TCTCCCGGTC ACTTCTGGTC
ACTATGGTCC TCATTGTCGT TGTCCTGGTC ACCATCATGA CCATTTACGA CTATTTTAGT
CTCAAAACCA GCACAGATGC GGAATTTTCA AACCTGCAAA ACCAGACGGA GGACACCATC
GGCGCTGCAT TACGGCTGGA CGACTCGGCT ACTACCGTCC TCGACGATCA GCTCAACACG
CAGATGAAAG CCGGATTTGC GGTTCTCTTT ACAGAATACA ACCGATCCGG TGAGAACCCG
CAAACCATGA ACCTCACCAG AGTCCAGGCT GCGCTCGGAG AGGGATACGA TATCTATATC
ATCAACGAAT CCGGGGTGAT CGTTTATACC ACATATCCTG CTGAGCAGGG TGTGGACTTC
CAGAGCATTC CCTATTTTTA TGCGTACCTG ACAAAAGTCC GTATGTCACA GGGTTTTTTC
CCGGATCGGG TGGTCCGCGA GATCCCTGAC GGCAGGTTCA TGAAATATGC CTACGAGGCA
ACGCCGGATC ACCAGTATAT CCTGGAGCTG GGGTACTCGC CCCCTGATTT TAACACAACC
AACCTCAGGC TTGATGACCG GGATAACATT GCCAGGTTTG TGTCCTTTAA TCCGTTCATC
AGTCAGTACC AGGTCTTTGA TACGACGGGA CATAGTACTG CCGATGACAG CTTGCCGGAC
ACGGTCACCG AATCATATAT CCAGCAGGCA ATTACCAGCA GGTCAACTAT TGAAACGGAC
GATGCGGCCA ACCATACCGA GACACGGTAC CTCTTTGTCG ATCTGAATAA CCCCCAGTAC
GGCTCCGATA TGAGCAGGGT GGTTGTGCTC ACGTACGATA CCGGGCGCGT CCGGAATGAC
CTCAACCACC TCGTTCTTTT CCACCTCCTC TTTGGAGGAT GCGCCCTCGG AATTGGATGC
TGCCTTGCTT TTTTACTGTC ACGCAGGATG ACCCGCCCGA TAGAGAAAAT AGCACATGAT
GCGGATATCA TCGCAAACGG GGACTTTGAC CACCGCATCG GGACAACAGA CGCACGGGAG
TTCGTGATCC TGGAAAAGAG CATCAATACC ATGGTGGATT CGCTCAAGTC CGCTACAGCC
CGGCTCAACG ACGAGGAGAT CTTCCACCGG GACCTTATCG ACCAGATGCC GGTGGGGATC
TTCCTCAAGG AGACAGATAC CGGGACCTAT ACATTCTGGA ACCGGGCAAG CGAAGAGATC
TTCGAACGCC CGGCAAAGGA TATGATCGGG AAGACCGATG CCGAGATCTT CTCTGCGGCA
GTGGCGGAGC AGATTAAAAA AGAGGAGACC GGCGCCCTTG CATCACGGGT GGAGATCAAG
TACAGAAAGA TCCATTCGAA ATCGCGGGGA GAACGCCTGA TCCATATCAT CATCGTCCCG
ATCTACGATT CAAAACGTTC CGTGCGGTAT ATGCTTGGGA TAGCAGAAGA TGTAACTGAC
GAGGCAGTAA CGCTGAAGCG GGACCTGATC TTCTCTATTA CCCGGAGCGA TATTCTCGAC
CAGCTCGCAA TCATCATTAC GTATCTCGAG CGTGCCCAGC TCAAGACCAC CCACGAGGCC
ATGCAGATGT TCTTTGATAA GACGATTGGC TCGGTGGAAT CCATCAAGAA CCAGATCGCA
TACGAACGGG CGCTCCAGAA CCCCGGCGTT ATCGCGCCCC GGTGGCAATC CGTGAACCAG
GCATTTGCCG AGGCCATACA GATGCTGCCC GAACATACGG CAGATATCAG CACCAGTGTG
GGGAAGATCG AGATCTTTGC CGATCCGCTC CTCCCAAGGA TCTTCTTTAG CCTCCTTTCG
CTCTCTTTCC GGCGCGGGGG CCCGGTTCTC TCGGCTATCC GTATGACCGC CCGCAGGAGC
AACGATTCCC TTGTTCTTGT CTATGAAGAC GACAGCCCGG GCATCCCGGC CCATGAGAAG
GAGAGGATCT TTGAATTCGG GTACAGCCAC GATGATATGG TCAGCCTCTT TTTGATACGC
GAGCTGCTCG GATTTACCGG AATCGCCATC ACCGAGACCG GGGGGACAGG AGAAGGTATC
CGCTTTGAAC TTGTCGTACC CAAAGGACGG TTCAGGGAAA GAAATTAG
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| Protein sequence | MKEQRPDPGN NHSFSRSLLV TMVLIVVVLV TIMTIYDYFS LKTSTDAEFS NLQNQTEDTI
GAALRLDDSA TTVLDDQLNT QMKAGFAVLF TEYNRSGENP QTMNLTRVQA ALGEGYDIYI
INESGVIVYT TYPAEQGVDF QSIPYFYAYL TKVRMSQGFF PDRVVREIPD GRFMKYAYEA
TPDHQYILEL GYSPPDFNTT NLRLDDRDNI ARFVSFNPFI SQYQVFDTTG HSTADDSLPD
TVTESYIQQA ITSRSTIETD DAANHTETRY LFVDLNNPQY GSDMSRVVVL TYDTGRVRND
LNHLVLFHLL FGGCALGIGC CLAFLLSRRM TRPIEKIAHD ADIIANGDFD HRIGTTDARE
FVILEKSINT MVDSLKSATA RLNDEEIFHR DLIDQMPVGI FLKETDTGTY TFWNRASEEI
FERPAKDMIG KTDAEIFSAA VAEQIKKEET GALASRVEIK YRKIHSKSRG ERLIHIIIVP
IYDSKRSVRY MLGIAEDVTD EAVTLKRDLI FSITRSDILD QLAIIITYLE RAQLKTTHEA
MQMFFDKTIG SVESIKNQIA YERALQNPGV IAPRWQSVNQ AFAEAIQMLP EHTADISTSV
GKIEIFADPL LPRIFFSLLS LSFRRGGPVL SAIRMTARRS NDSLVLVYED DSPGIPAHEK
ERIFEFGYSH DDMVSLFLIR ELLGFTGIAI TETGGTGEGI RFELVVPKGR FRERN
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