Gene Mboo_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0820 
SymbolmetG 
ID5411499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp794139 
End bp796127 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content56% 
IMG OID640868045 
Productmethionyl-tRNA synthetase 
Protein accessionYP_001403981 
Protein GI154150363 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.816271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC CACCGCTGCT TGTTACCTGC GGGCTCCCGT ACACAAACGG GCCCTGCCAC 
CTCGGGCACC TGCGAACGTA CGTCCCTGCC GACTGCTACG TCCGCTACAT GCGGCGGACC
GGTGAAGAGG TTGTGTTTGT CTCCGGGTCG GACAACCACG GGACACCTAT CGTAGTCTCG
GCAGAGGAGC AGGGGACCAC CCCCCGGGCA CTCTCCGAGC AGTACCACCG GCACTTCGAT
GAGACCTTCA GGCGGATGGG GGTATCCTTC GATCATTTCG GCATGACTGA TGACCCGGCC
TGCCACCACA GGACACAGGA TATTGTCCAG CGCCTGGTGG ACAACGGTTA CGTGTACAAG
CAGGTCGTCA ACCAGGCCTA CTGCCCGAAA TGCAAGCGGT TCCTTCCCGA CCGGTACGTG
GAGGGGATCT GCCCCTACTG CGGCAAGCAG GCACGGGGAG ACGAGTGCGA CCAGGGGTGC
GGCAAACACC TTGAGCCCGG TGAGATCAAG GATCCGGTCT GCAAGATCTG CGGGACAAAA
GCGGAGTTCC GCAACCAGGA GCATTACTTC TTAAAGCTCT CCGCATTCAG GGATTACCTC
CTCCCCTTCC TCGACAATCT CAAGGGCACG AGCAATGCGA GGAACTATGC CATCGGCTGG
ATCAAGGACG AACTGCATGA CTGGTGCATT ACCCGGACAC TCGAATGGGG GGTGAAGTTC
CCCGGCAGGG ACGATCTCGT AGTCTATGTC TGGGTCGATG CTCCGATCGG CTATATCGCG
TTTACCGAAG AGTGGGCCAA AGAAAACGGC AGGGACTGGA AGCGGTACTG GTGCAAAGAT
AACCGGGTAA CGCACTTTAT CGGTGGTGAC ATCATTTACC ACCACTGCAT ATTCTGGCCG
GGGCTCTTAA AAGGCGCAGG ATACGGGGAA CCGTATGCAG TGGTGGCAAG CGGGATGGTC
AAAGTGGATG ACCATAAGTT CTCAAAGTCG CGCGGGTACG TGGTCTGGAC AAACGATGAT
TATCTCGACA AGGGACTCCC CGCCGATTGC CTGAGGTATT ACCTGCTCGC CTACACAAGC
CACACAAAAG AACTCAATTT TTCCTGGAAG GTCTTTGGCG AGCGGATCAA CAACGAAGTG
GTCAATATCC TTGGGAACTT CCTGTACCGC ACGCTCTTTT TTGCGCACAA GGAGTTCGGC
GGTGTCCCCG GTGGCAGTGT CGATCCGGCA ATCCTTGCAG AGATTGAGAA GTGCCAAAAG
AGCGTGGATG ACCAGATGCA GGCCTACGAA TTCAAGGGTG CCGTCGATAC TGTCATGGGG
CTTGCAGCAT TCGGGAACAC CTACATCCAG ACCAATGCAC CGTGGAAACT GATCAAGACC
GACCGGGCTG CGGCAGCACA GGTCATCAAA AATGGCATCC AGATCGCAAA GGCACTTTGT
CTCCTTATTG AACCGGTGAT GCCGGTAAAA GCTCAGGAGT GCTGGGCACA GCTTGGCTAT
ATCGACAGGG TCGCCGCCCA CCGGGTTGAT GAGGGAGTGG TGATCGTGCC CGAACGGCAG
ATCCCGGCCC CGGCCCCGCT CTTTGCCCGG CTCGAAGAAA AGCAGATCGC AGAGCTGGAT
GCTGTCCTCC AGCAGCGTGT CCGCGATGCA GACAAAAAAA CGGAGAAGAC ACCGATGATA
TCGATAGAAG ACTTCAGTAA AGTCGAGATA AAAACCGGAA AAGTGCTCGC AGCAGAATCC
ATCCCAAAAT CGAGCAAGCT CTTGAAACTC CAGGTGGATA TCGGCGGTGA GACCCGGCAG
ATCGTGAGCG GGATAGCCGC ATTCTACAAA CCCGACGAAC TGGTTGGTAA GGACGTAATC
GTGCTTACCA ACCTTGCACC GGCAAAGATC TTCGGCGTTG AGAGCAATGG TATGATCCTT
GCAGCCGGGG ATGCGGCCTC TTTGCTTACT CCCTTAAAAC CGGTGGAGCC GGGAACAAAG
ATACGATAA
 
Protein sequence
MTKPPLLVTC GLPYTNGPCH LGHLRTYVPA DCYVRYMRRT GEEVVFVSGS DNHGTPIVVS 
AEEQGTTPRA LSEQYHRHFD ETFRRMGVSF DHFGMTDDPA CHHRTQDIVQ RLVDNGYVYK
QVVNQAYCPK CKRFLPDRYV EGICPYCGKQ ARGDECDQGC GKHLEPGEIK DPVCKICGTK
AEFRNQEHYF LKLSAFRDYL LPFLDNLKGT SNARNYAIGW IKDELHDWCI TRTLEWGVKF
PGRDDLVVYV WVDAPIGYIA FTEEWAKENG RDWKRYWCKD NRVTHFIGGD IIYHHCIFWP
GLLKGAGYGE PYAVVASGMV KVDDHKFSKS RGYVVWTNDD YLDKGLPADC LRYYLLAYTS
HTKELNFSWK VFGERINNEV VNILGNFLYR TLFFAHKEFG GVPGGSVDPA ILAEIEKCQK
SVDDQMQAYE FKGAVDTVMG LAAFGNTYIQ TNAPWKLIKT DRAAAAQVIK NGIQIAKALC
LLIEPVMPVK AQECWAQLGY IDRVAAHRVD EGVVIVPERQ IPAPAPLFAR LEEKQIAELD
AVLQQRVRDA DKKTEKTPMI SIEDFSKVEI KTGKVLAAES IPKSSKLLKL QVDIGGETRQ
IVSGIAAFYK PDELVGKDVI VLTNLAPAKI FGVESNGMIL AAGDAASLLT PLKPVEPGTK
IR