| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0813 |
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| Symbol | |
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| ID | 5411492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 783560 |
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| End bp | 785797 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640868038 |
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| Product | Hef nuclease |
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| Protein accession | YP_001403974 |
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| Protein GI | 154150356 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1111] ERCC4-like helicases
[COG1948] ERCC4-type nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0382801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTGCA TCAGCCACCC CCTCATCCGA CCTGACAGCA TTGAGTCGCG GGAGTACCAG
CTCGGGATCG CAATGAAGGC GCTGGATGCA AACACGATGG TGATCCTCCC GACCGGCCTT
GGGAAGACCG CGATCGCCCT GCTTGTGGCT GCATCCCGGC TCTACAACGA AGGAGGGAAA
GTGCTGATGC TTGCCCCCAC AAAGCCGCTC GTGGAACAGC ACCTCCGGTT TTTCGAAAAA
TACCTGATCG CAAAGAGCCC CACCGCTCCC GATGCCTGCC AGTTTGCGAT GTTTACGGGA
GAAGCACCGC CCACCGAGCG GACAGCGGAA TGGGAGCGCT CACAGGTAAT CTTTGCCACC
CCGCAGGTAG TAAAAAACGA TCTTATTGCA GGACGCTACA CCCTGCAGGA TGTGGCACTC
CTCATTGTGG ACGAGTGCCA TCGGGCTGTA GGAAACTACG CCTATGTTTT TCTTGCCCGG
CGTTATCACG ACACGGCTGC AAAACCCCTG CTCCTTGCCA TGACCGCATC TCCCGGCGGT
TCGCAGGAGA AAGTCAGCGA TGTCTGTGCT AACCTCGGTA TCGCCCATGT CGAGAACCGG
ACCGAGAACG ATCCCGATGT CAGCCCCTAT GTCCACGAGC GCGAGGTCGA GGTCCACCAG
ATCGATCTCC CGGCAGAACT AAAAAGTGCC ATCCATGCCA TCCACACGCT GATCGATGAC
CGGCTGGGTC TTCTGGCCTC GCTGGGTTTT GCGGTCCCGA AAAGAGACCG GCTGTCGATG
AAGGAACTTG CCGGGATCAA TGCGCAGATC CAGCAGCGGA TCCAGAACCG TGATCCGGCA
GGGTACTCCG CTGCCTCGGT GTACGCGGAG TGCCTCAAGC TCAAGCACGC AGTAACCCTT
GCAGAATCAC AGGGAAGCGA GGTCTTTAAG GGGTACATCG CAAAACTGGT TGCCGAAGGT
AGGGGATCCG GGGGGAGCAA GGCCAGCCAG CGGCTGAGCC GGGACCCGGC CTTCCACTCC
TTGTACGAAC GGACGATCTC CTGGGCCGGG GAACTGCATC CCAAACCCGC AGCAGTTCTT
GGAATCGTAA AAGAGCAGAT CGATACTCAT CCCGACAGCC GCATCATTAT CTTTGCCACC
TTCCGGGACA CGGTCCAGCT CCTTGTCGAT TACCTCACCA AAAACGGGAT CTCCTGCGAA
CGGTTTGTGG GCCAGGCCAC AAAGGACGCG GAAAAGGGTC TCTCGCAGAA GAGGCAGATC
GCTGCCCTTG CCCGGTTCCG AGCCGGCGAG TTTAAGGTTC TTGTCGCAAC ATCGGTCGGG
GAGGAGGGCC TTGATGTCCC CTCCACCGAT CTCGTGATCT TCTACGAGCC GGTCCCCTCC
GAAATCCGAT CCATCCAGCG CAAGGGACGG ACCGGCCGGT CGGGGGCGGG AAGGGTGGTG
GTGCTCGCGA CAAAAGGCAC TTCGGACGAT GTATACCGCT ACGTGAGCCA GACAAAGGAG
CGGCAGATGC AGAAGAACCT GCGGCAGATG AGCGGGCAGG ATATCACGGC ACAGCAACCG
GTCATGGCCG ATCAGACCCG GATCGAAGAG TTCACCCCGC AGGGCCCGGC GATACGGATC
GACGACCGCG AGACCTCCTC GAAGGTTGTC GAGGAACTCT CCGGGATGGG GGCAGCGATC
CGGCTTGAGC GGTTGCCTCA GGGGGACTAT GCGATCGGTG ACCGGATCCT TGTTGAGCGC
AAGACCGCTC GGGACTTTGT CGATACCCTC ATCAACCGTG ACCTTCTCGG GCAGGCCAAA
TCTCTTGCGG ATGCCGTGCC CCGGCCGGTC ATGGTGATCG AGGGGGGCGA CATCTACACA
CAACGGGACA TGAACCCGAA CTCACTTCGG GGGGTGCTCG CGGCGCTTGC CATCGATATG
GGCATCACCC TCCTCTTTAC CCGGGACGAG CAGGACACGG CGCAGATGCT CTTTGTGATT
GCAAAAAGGG AAGAAGGCGA GCGCGGCGAG CGCAAGCTCC ACCCGCACAA ATCATTTACC
TCGGCAAAAG AGGAGCAGGA ATATATCATC TCAGCGTTTC CCGATATCGG CCTGAAAAAT
GCACGGCTGC TGCTCGCGCA TTTTGGATCT GTTCAGGGGA TTGTGAATGC GACACTCGAG
GAACTTGTGG CGGTGAAAGG AATCGGGGAG AAGACCGGCG GAAAGATATT CGAGCTGTGC
CGGAGAAAAT ACGGATAA
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| Protein sequence | MPCISHPLIR PDSIESREYQ LGIAMKALDA NTMVILPTGL GKTAIALLVA ASRLYNEGGK
VLMLAPTKPL VEQHLRFFEK YLIAKSPTAP DACQFAMFTG EAPPTERTAE WERSQVIFAT
PQVVKNDLIA GRYTLQDVAL LIVDECHRAV GNYAYVFLAR RYHDTAAKPL LLAMTASPGG
SQEKVSDVCA NLGIAHVENR TENDPDVSPY VHEREVEVHQ IDLPAELKSA IHAIHTLIDD
RLGLLASLGF AVPKRDRLSM KELAGINAQI QQRIQNRDPA GYSAASVYAE CLKLKHAVTL
AESQGSEVFK GYIAKLVAEG RGSGGSKASQ RLSRDPAFHS LYERTISWAG ELHPKPAAVL
GIVKEQIDTH PDSRIIIFAT FRDTVQLLVD YLTKNGISCE RFVGQATKDA EKGLSQKRQI
AALARFRAGE FKVLVATSVG EEGLDVPSTD LVIFYEPVPS EIRSIQRKGR TGRSGAGRVV
VLATKGTSDD VYRYVSQTKE RQMQKNLRQM SGQDITAQQP VMADQTRIEE FTPQGPAIRI
DDRETSSKVV EELSGMGAAI RLERLPQGDY AIGDRILVER KTARDFVDTL INRDLLGQAK
SLADAVPRPV MVIEGGDIYT QRDMNPNSLR GVLAALAIDM GITLLFTRDE QDTAQMLFVI
AKREEGERGE RKLHPHKSFT SAKEEQEYII SAFPDIGLKN ARLLLAHFGS VQGIVNATLE
ELVAVKGIGE KTGGKIFELC RRKYG
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