| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0787 |
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| Symbol | |
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| ID | 5411922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 757347 |
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| End bp | 759032 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640868011 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001403948 |
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| Protein GI | 154150330 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.605081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.12809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA GTACTATTCT TTCCCTGGTA CTCCTGCTCT GTCTTCTCTG CCTGCCGTTT
GCAACCGCAG AGTCACAGGC CGGGACTGCC ACCCTCTCTT CCGGGGCATC CGGTATTACG
GCGTTAAGAG CCTCGGACAT ATCCGGTACC GACACCACGA CCGAGCCCAC GATGGAGCCG
GTCACGGTGC CAACCGAGGA GCCGACCATT GCTCCTACAA CTGAAGTGAC CACGCAACCA
ACCGAGAATC CAACGATAGC GCCCACAACT GAAGAGACCA CTGTGCCGAC CACAGAGACG
CCAACCCTCG CTCCAACGAC CGAGGAAACT TCTGTACCTA CGGTAATGCC GACGGATACT
GTCACAACGG CTGAGACCAC CTCACCGGTC CCGGGGCCGT ACGCGCCGGT TGCCAGTTTT
ACGGCCTCTC CTACCTCCGG TAACGGACCG CTTACCGTCC AGTTCACGGA CACATCCATT
AACAGCCCGA CCATGTGGTA CTGGGACTTT GGCGATGGTT CCAGTGCAGG TACGACTGCC
TCACCAGCCC ACACCTATAC AGACCCGGGC ACATACACGG TGACCCTGAC TGCAAGCAAC
CAGTACGGCT CGGATACGAT CACCCAGTAT GATATTGTTA CGGTGAACGG GCAGGTAATG
AGCAACGGCG CGATCTATGC CCAGTCCGTC CCGTACGGGG CTACGATCTA CGTAAACGGC
GATAGTTACG GGACTGCGCC GGTCACCATC AACAACCTTT TTGCGGGCAC CTATTCGGTT
ATGGCCTACA TGAGCGGCTA CACAACCGAT GTGCGCACGA TCACGGTATA CTCCGGCCAG
ACCACCGGAT ATTACCCGTC CCTCCAGCCC TCGCCCAACC CGCCGGGAAC GCTCGGCTCC
ATCTACGCCC AGTCATCCCC TGCCGGGGCA ACCATCTACG TGAACGGGGT ATCGTACGGG
ACCTCGCCGC GCACGATCAA CAACCTGCTC CCCGGCACGT ACTCGGTCAT GGCCTACCTG
AGCGGCTATG CCGCAGACTC CCGGACCATC ACGGTTACTT CGGGCCAGAC TACCAGTTAC
TCGCCGGTCC TCCAGTCCCT GCCCAATCCG GCAAATACCG GCGCAATCTT TGCGCAGTCG
ACCCCGGACG GCGCAGCGAT TTATCTAAAC GGCGTATACC AGGGTGTCTC CCCGCTCACC
ATCACGGGTC TTTCCCCCGG CACCTACACG CTCAAGGCCA CGCTGAGTGG GTACTCCGAT
GATGTGCAGC GGATAACGAC AAGCGCCGGC CGGGTCTCGT TTTATTCCCC GGCGTTCTAT
CCGTCCCCGC AACCCGTTGG CTCCGGCCAG GGGATAATCG CGGTGTACGC AAACGTGAAC
GGCGCCCCGG TATATTTCGA CAATGCCTAT GAAGGAAATG TCACGAGCGG CGTACTCTAT
GTGACCGTGT CAACTACAGG AACACCTGTC CAGACCGTCC GGGTCGAGAG CACCGGCTAT
ATCCCGTATA CCACAAGCCT CACGCAGTGG CCCGGGAACG GCGAGACCGT GAAGGTCCAG
GCAACGCTTG TTCCTGCACC GGTCCCCACG ACCAAAAAAT CGCCCGTTCC CACACTACTT
TCCCTGGGTG CACTGCTGGG TGCCGGGGCC CTTGTCCTCC TCGCACGGCA GCAGAAGAAA
CGTTAA
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| Protein sequence | MKYSTILSLV LLLCLLCLPF ATAESQAGTA TLSSGASGIT ALRASDISGT DTTTEPTMEP
VTVPTEEPTI APTTEVTTQP TENPTIAPTT EETTVPTTET PTLAPTTEET SVPTVMPTDT
VTTAETTSPV PGPYAPVASF TASPTSGNGP LTVQFTDTSI NSPTMWYWDF GDGSSAGTTA
SPAHTYTDPG TYTVTLTASN QYGSDTITQY DIVTVNGQVM SNGAIYAQSV PYGATIYVNG
DSYGTAPVTI NNLFAGTYSV MAYMSGYTTD VRTITVYSGQ TTGYYPSLQP SPNPPGTLGS
IYAQSSPAGA TIYVNGVSYG TSPRTINNLL PGTYSVMAYL SGYAADSRTI TVTSGQTTSY
SPVLQSLPNP ANTGAIFAQS TPDGAAIYLN GVYQGVSPLT ITGLSPGTYT LKATLSGYSD
DVQRITTSAG RVSFYSPAFY PSPQPVGSGQ GIIAVYANVN GAPVYFDNAY EGNVTSGVLY
VTVSTTGTPV QTVRVESTGY IPYTTSLTQW PGNGETVKVQ ATLVPAPVPT TKKSPVPTLL
SLGALLGAGA LVLLARQQKK R
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