Gene Mboo_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0701 
Symbol 
ID5411555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp665623 
End bp666333 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content54% 
IMG OID640867921 
Productcobalamin 5'-phosphate synthase 
Protein accessionYP_001403862 
Protein GI154150244 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.216736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCGG TTCTTTCGCT TTTGCAGTTT ACTACGCTTC TTCCTGTGGG AAAGCCGCTA 
GATTTTGATC TTTTTGCACG TCACTCATGG ATATTTCCGA TTGCCGGCTA CGTAATTGCC
CTTCTGGTTG CCATACCGGT ATTTTTCATA AGGGACACGG TGCTTGCCGC GGCAGTAGCC
GTTGCCGGGG TGATTCTCTT GTCGGGGGCC CACCATTTTG ACGGCCTGCT CGATCTCGGT
GACGGACTCA TGGCGCAGGG TGACCGCGAA AAACGGACGC GCGCGCTCAC AGACCGGTGT
GTAGGAGCAG GGGGAATTGC CGCGGGTATT GTCGTCACTC TTCTTCTTTT TGCCGGTCTC
CATGCAGCGA CGTCCCTGAT TTCTGCCCTT ATCATAGGCG AGGTTGCGGC AAAATTCTCC
ATGGCGTTTC TTACAACCTA CGGGGCGCCG TTCAAGGAAG GAATGCACAG TTATCTCCAC
CGGTTTTCAA AGCCTTGGTT TCCCTTCCTT TCACTCTTGC TCTGTATCCC TCTGGTGCTT
CTCCCAGTAT CTCCCTTCCG GCTCGCAGTT GCCGCTCTCA TGATGATCCT CTGCCCGGTC
GTGCTTCTTA CCATTTCAGA AAGAATTTTC GGCGGAGTCA ATGGCGATGT GGTCGGGGCA
TCAAACGAGA TCACCCGGGC ACTGGTTGTT GTTGCACTGG CACTGGTCTG A
 
Protein sequence
MRPVLSLLQF TTLLPVGKPL DFDLFARHSW IFPIAGYVIA LLVAIPVFFI RDTVLAAAVA 
VAGVILLSGA HHFDGLLDLG DGLMAQGDRE KRTRALTDRC VGAGGIAAGI VVTLLLFAGL
HAATSLISAL IIGEVAAKFS MAFLTTYGAP FKEGMHSYLH RFSKPWFPFL SLLLCIPLVL
LPVSPFRLAV AALMMILCPV VLLTISERIF GGVNGDVVGA SNEITRALVV VALALV