| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0602 |
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| Symbol | |
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| ID | 5412162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 571033 |
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| End bp | 572010 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640867821 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001403763 |
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| Protein GI | 154150145 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.785398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGA TCGCGATTGT TGAAGGTGAC GGGATCGGCC ATGAGGTGAT CCCGGTAGCA
CATCAGGCGC TCGAACTGCT CCATCCCGAG TATGATTACT TCCCGGTGGA TGTCGGGTAC
GGGCGCTGGG AGCAAACCGG CTGTCCCTGT GCCGATGCCG ATATCGCGGC CTTGAAAACT
GCCGATGCTG TTCTCTTTGG GGCCGTCACG ACCCCTCCTA TGAGGGATTA TCAGAGCGTT
GTCCTGCGGA TCAGGAAGGC CCTCGACCTG TACGCAAACC TGCGGCCGGT GAAAAGCGAC
GGTTTTGATA TCCTGATCGT ACGTGAGAAT ACCGAGGGGA TGTACTCGGG GATTGAGGAG
ATCGGCCCGG ATCGGGCAAC AACGCTGCGG GTGGTAAGCC GGACGGGTAC CGAGAGGATT
GTGCGGGCCG CGATCCGGTG CGCCGGGCAG CGCCGGGGGA AACTGACCAT CGGGCACAAG
GCGAACGTGC TCAAATCCGA TGTCTTTTTC CGGGACATCT GTATAGCGGA GGCACAGAAC
GCCGGGGTTG AATATAATGA CAAATATATC GACGCCCTTG GCCTTGACAT CCTCCAGCAT
CCCGGCGCAT ACGATGTGGT TGTAACCACG AACATATTCG GCGACATCAT CTCGGATGTC
TCCTCGTACC TTGTCGGGGG ACTGGGCCTG GTGCCGAGCG CCAATATCGG CGACCGGTAT
GCACTCTTTG AACCGGTGCA TGGCAGCGCC CCGGATATTG CCGGTAAGAA CATCGCAAAC
CCCATTGCGG CCTTACGGAG CGCGGCAATG CTTCTTGCCC ACATCGGGGA TCAGGAAGGT
GCCGAGCGGA TTGAATCCGC CATAGGTACC GTCATTTCTT CTGGTATCCT GACCCGGGAT
ATCGGGGGAT CGGCCGGGAC ATGGGAGTTT GGCGAAGCAG TCCTCAAAGC TCTGGGAAAT
TGCCCGGTTG GCCGCTGA
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| Protein sequence | MTRIAIVEGD GIGHEVIPVA HQALELLHPE YDYFPVDVGY GRWEQTGCPC ADADIAALKT
ADAVLFGAVT TPPMRDYQSV VLRIRKALDL YANLRPVKSD GFDILIVREN TEGMYSGIEE
IGPDRATTLR VVSRTGTERI VRAAIRCAGQ RRGKLTIGHK ANVLKSDVFF RDICIAEAQN
AGVEYNDKYI DALGLDILQH PGAYDVVVTT NIFGDIISDV SSYLVGGLGL VPSANIGDRY
ALFEPVHGSA PDIAGKNIAN PIAALRSAAM LLAHIGDQEG AERIESAIGT VISSGILTRD
IGGSAGTWEF GEAVLKALGN CPVGR
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