Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0581 |
Symbol | |
ID | 5411510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 550358 |
End bp | 551068 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640867800 |
Product | hypothetical protein |
Protein accession | YP_001403742 |
Protein GI | 154150124 |
COG category | [S] Function unknown |
COG ID | [COG2043] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.213239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0817202 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCCG AGAAAATAGC AGTTAATTAC CACGAGGCTT CGGAGTCGCT TAAGAAGATC CTGAACCTGA AGGGATCGCC GGTTGCCATC CGGTTTGCAC CCACCAAAGC CGATATCCCG GCCGGGATCC CGGCGCTGGA CAAGACCATC CGGCACTGTT CCATGGTAAA CATGGCCCGT ATGGAGCAGA AGATCTTCTA TGCCACCGCT GACCGGCATG ACTGTAACGG GGGGGCGTGG TCCCTGGGAT TAAAGGAGAT CACGCCGACC CTTAAGAACG GTGAATTCTA TTTTAAACTG GGTAAATTTG ACAGTGATGC TGCCTGCAAG CGAACGATAG AGCGGATCCC GCACCTGGAG ACCGGTGAGA CCTATGCCAC GCTCTATGCG CCGCTGGAAA CAACGCCGTT TTCCCCGCAG GTGATCGTGA TCGTGACAAC GCCCCGGAAC ATGCTCAAGC TTGCGCAGAG CAGCCTTTTC CGTCTCGGGG GGCGGATCTG TGCAGAATTT GCCGGTATCC AGTCGGTCTG TGCAGATGCA ACCGCATACC CATTTCTCTC GGGCCGGCCG AACTTCTCGC TGGGCTGCGA CGGGTCCCGA CGGTTCTCCG GCATCGGCGA TGACGAACTG GTGATGGGAT TCCCGGCCGA GATGCTGCCG GAGCTCGTCA CCGCGCTGCC CATCGTTACC GGGGCTGCCG GTTCAAAATA A
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Protein sequence | MSSEKIAVNY HEASESLKKI LNLKGSPVAI RFAPTKADIP AGIPALDKTI RHCSMVNMAR MEQKIFYATA DRHDCNGGAW SLGLKEITPT LKNGEFYFKL GKFDSDAACK RTIERIPHLE TGETYATLYA PLETTPFSPQ VIVIVTTPRN MLKLAQSSLF RLGGRICAEF AGIQSVCADA TAYPFLSGRP NFSLGCDGSR RFSGIGDDEL VMGFPAEMLP ELVTALPIVT GAAGSK
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