Gene Mboo_0581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0581 
Symbol 
ID5411510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp550358 
End bp551068 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content58% 
IMG OID640867800 
Producthypothetical protein 
Protein accessionYP_001403742 
Protein GI154150124 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.213239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0817202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG AGAAAATAGC AGTTAATTAC CACGAGGCTT CGGAGTCGCT TAAGAAGATC 
CTGAACCTGA AGGGATCGCC GGTTGCCATC CGGTTTGCAC CCACCAAAGC CGATATCCCG
GCCGGGATCC CGGCGCTGGA CAAGACCATC CGGCACTGTT CCATGGTAAA CATGGCCCGT
ATGGAGCAGA AGATCTTCTA TGCCACCGCT GACCGGCATG ACTGTAACGG GGGGGCGTGG
TCCCTGGGAT TAAAGGAGAT CACGCCGACC CTTAAGAACG GTGAATTCTA TTTTAAACTG
GGTAAATTTG ACAGTGATGC TGCCTGCAAG CGAACGATAG AGCGGATCCC GCACCTGGAG
ACCGGTGAGA CCTATGCCAC GCTCTATGCG CCGCTGGAAA CAACGCCGTT TTCCCCGCAG
GTGATCGTGA TCGTGACAAC GCCCCGGAAC ATGCTCAAGC TTGCGCAGAG CAGCCTTTTC
CGTCTCGGGG GGCGGATCTG TGCAGAATTT GCCGGTATCC AGTCGGTCTG TGCAGATGCA
ACCGCATACC CATTTCTCTC GGGCCGGCCG AACTTCTCGC TGGGCTGCGA CGGGTCCCGA
CGGTTCTCCG GCATCGGCGA TGACGAACTG GTGATGGGAT TCCCGGCCGA GATGCTGCCG
GAGCTCGTCA CCGCGCTGCC CATCGTTACC GGGGCTGCCG GTTCAAAATA A
 
Protein sequence
MSSEKIAVNY HEASESLKKI LNLKGSPVAI RFAPTKADIP AGIPALDKTI RHCSMVNMAR 
MEQKIFYATA DRHDCNGGAW SLGLKEITPT LKNGEFYFKL GKFDSDAACK RTIERIPHLE
TGETYATLYA PLETTPFSPQ VIVIVTTPRN MLKLAQSSLF RLGGRICAEF AGIQSVCADA
TAYPFLSGRP NFSLGCDGSR RFSGIGDDEL VMGFPAEMLP ELVTALPIVT GAAGSK