| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0483 |
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| Symbol | |
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| ID | 5410168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 467575 |
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| End bp | 468189 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640867695 |
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| Product | translation initiation factor IF-2 subunit beta |
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| Protein accession | YP_001403644 |
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| Protein GI | 154150026 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG1601] Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain
[COG3269] Predicted RNA-binding protein, contains TRAM domain |
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| TIGRFAM ID | [TIGR00311] translation initiation factor aIF-2, beta subunit, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.677558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACT CCTACGAAAA TCTCTTGAAA AAAGCCTATT CCCACATTTC TGAAAAAAGT
GCCTCTTCGG AGCGCTTTGT GGTCCCTGAG GCCAAGGCTT ACGTGGAAGG TAAGACCACG
ATCCTCGAGA ATTTCGCAGA GATCGCTGAC ACCGTCCGTC GCGACAAGGA TCACCTGATG
AAGTATATGC TCGGTGAACT GGGAACCTCC GGCAAAATCG AGGGCAACCG GGCGATCTTC
AACGGGAAGT TCGAGATTTC CCAGATACGG ATGATCATCA AGAGTTACGT GGATGATTAC
GTAATATGCT CTGAATGCGG CAAGCCGGAC ACCCGCCTGG TCAAGGACGA CCGGGTTCTA
CTCCTCCGCT GCGATGCCTG CGGCGGTCAC CGCCCGGTCC GGAAGCGTAA GGCAAGAACC
GAACCGGCTT CGGAAAACCT TGAAGAGGGA CAGGTTTTGG ATGTCGAGAT CCAGTCGCTC
TCCAAGCGCG GCGATGGTGT CGTGAAGATG GGCCGTTACA TCATGTATGT CTCGAATGCA
AAGCCCGGCC AGAGCGTAAA GATCAAGATC TCCCGCATAT CTGGATCGAT TGTCTTTACC
GAAAGAGCGG AATAG
|
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| Protein sequence | MTDSYENLLK KAYSHISEKS ASSERFVVPE AKAYVEGKTT ILENFAEIAD TVRRDKDHLM
KYMLGELGTS GKIEGNRAIF NGKFEISQIR MIIKSYVDDY VICSECGKPD TRLVKDDRVL
LLRCDACGGH RPVRKRKART EPASENLEEG QVLDVEIQSL SKRGDGVVKM GRYIMYVSNA
KPGQSVKIKI SRISGSIVFT ERAE
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