Gene Mboo_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0456 
Symbol 
ID5412148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp437660 
End bp438448 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID640867668 
Producthypothetical protein 
Protein accessionYP_001403617 
Protein GI154149999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.116947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAT TCTGTCCTTC CTGCGGGATG CCCCTGCCAG ATGAGAACGC ACAGAACTGC 
CTTGAGTGCG GGGCGGTTGT CCGGCCTCCG GTACCTGAAA AAACAGAGAT CCGCGATCCC
TGGGTGGCGG TCATCCTGAG TTTTTTCTGT GCCGGATGGG GCCAGTGGTA TAACGGGAGC
ACGTTAGGGG GACTGAAATT TTTCCTCGCC TCGCTGGGCC TTGGGATCCT TGCCCTCGCC
CTGACCTTTA CCAGCATAGT AAGCTCCCCG GTGTCCGGCA TAATGGGCCT TGCATTCATC
GCGGTCCTTG TCCTCCTCGG GGTCTGGATA TACGGGATGT ACGATTCCTG GACTATGGCA
GAAAAAATTA ACCGGGGTGA AACCGGATTT ACCGGCAAGA GCGGTATGTT CTGGCTGCCG
GTAATCCTGA TTATCCTTGT CCCGGTACTC CTTTTTGTAT CAGCTTTTGT TGCAACGATG
GTCTTTGCCA CGGCCGGTTC AGTGCAGCAT ACCAAGGTTG TGGCCGTGAC TGCCTACCGG
CCGGATGCAG GCCATATTGT TATTACGTAC CAAGGTGGAC AGGATGCTGC CTCCCTGCAA
TCGATCTCCG TTACCGATAA CGGGGCAGTG GCTGGCGGGA TAACTATCCC GGCAGGCAGG
GGCCTTACCT CGCTCCCCGT GGGGATGAAT ACCACGGTTC CCGCATCCAC GCAAGCGTCC
AACCATATCG TGGTCACCGG CCTCTTCTCC GACGGAACAA GCCAGGTGAT CCTCGATATT
ACATTATAA
 
Protein sequence
MPKFCPSCGM PLPDENAQNC LECGAVVRPP VPEKTEIRDP WVAVILSFFC AGWGQWYNGS 
TLGGLKFFLA SLGLGILALA LTFTSIVSSP VSGIMGLAFI AVLVLLGVWI YGMYDSWTMA
EKINRGETGF TGKSGMFWLP VILIILVPVL LFVSAFVATM VFATAGSVQH TKVVAVTAYR
PDAGHIVITY QGGQDAASLQ SISVTDNGAV AGGITIPAGR GLTSLPVGMN TTVPASTQAS
NHIVVTGLFS DGTSQVILDI TL