Gene Mboo_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0396 
Symbol 
ID5411412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp383125 
End bp383622 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content45% 
IMG OID640867610 
ProductMarR family transcriptional regulator 
Protein accessionYP_001403559 
Protein GI154149941 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTA AACCCCATGA CGCTCATCGT GATCCACAGA TCTCAAAACT CTTTCAACAA 
TGGAACCGGA TTACCAACAA GATACTCCGA AGTGAGAGTG CTCCCCAGGA TTTTGGGACT
GGCGGTCTGC TCTTCTCTTC CGAGATCCAC ACAGTCTGTG CAATCGGTAA CAATCCCGGT
ATCAATATCA CTGACCTCTC AGCTCAGCTC GGAGTAACAA AAGGGGCAAT TTCCAAACTG
GCCAAAAAAA TGGAAGAGAA AGATCTGATC GAGAGGTACC ATAAACCCGG CAATGACAAG
GAAATCCTGC TCAGCCTTAC CCCAAAAGGA AAAAAAGTAC ACATTGGGCA TCGGGAATAT
CACGCAAAAG AGTTTGAACG GCTTTCGGTT GAGATCGAAA AACTGACCGA AGAACAAGTC
AGGTTCCTGT TCGAGGTTTT TGGATTTATC GAAGAGATGA TCGACTCTAC ACTTCCTAAT
AGGGAAGGTA CATCATGA
 
Protein sequence
MSTKPHDAHR DPQISKLFQQ WNRITNKILR SESAPQDFGT GGLLFSSEIH TVCAIGNNPG 
INITDLSAQL GVTKGAISKL AKKMEEKDLI ERYHKPGNDK EILLSLTPKG KKVHIGHREY
HAKEFERLSV EIEKLTEEQV RFLFEVFGFI EEMIDSTLPN REGTS