Gene Mboo_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0378 
Symbol 
ID5411774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp368753 
End bp370075 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content49% 
IMG OID640867592 
Producthypothetical protein 
Protein accessionYP_001403541 
Protein GI154149923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0579188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.656469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA AAATAACCAT AACCGTCCTC TTTGTGATCC TTCTTACACT GTTTTGTTCC 
GCTCCGGTAG TGGGACAATC ACGTACATTA CAACAAACCA ATGATATCCT GCTCCCATTA
ACCAGTCCAA GTGGTAACCA GTCTCCTCTG ATCCACATCG CAGATAACGG GAACCTTGTA
ACCGTGAATT ACCCTTATGA TCCAAATTTT TTCGTATATG ACGGGAACGG ATCATTCCTC
TGGAATGCCA CCTTATCCGC CGAACAATCT CCCTGGATCT CGTCAGTCAG TGTTGCTCCT
GACGGGCAGT ATCTTATCGT TACCCAGCTT GTGCCTGCCT GTTGCCATGG CTCTGTTACA
AATACTTCAT CAAACAAGGT AATCCTTTTT GACAGGTCCG GTGCGAGATC GTGGGAATAT
CCTACATACA GCCCGCCGCT CACATCAACG ATCTCCTACG ATAACCAGAA TATTTTTATT
GGTATGAATG ATGGCCGGAT CATCAATCTT GATCGCGAAG GCACCGCCTG TTGGACAGCC
CGGGTAGACG CACCGGTGCT CTCACTCACG ACCTCCGCCG ACAGTAGCAC TATCGTGGCA
ACAGGGGAGA GTAATTATTA TTCTAACAAA ATATATGGCG AACCGCTCAA TCCCCATGAC
CTTTTTGTAC TGGACAAAAA TGGTACGCTG CTCTGGAATT ACCAGACCAG AGGGACGAAC
ACTGCTGCGA TCAGTGACGA CGGATCGGTA ACCGCCGTCC TGAACGAGCG TAACGGCAAC
CTTTTGCTGT TTAACCGGAC TGGTGGCAGA CAGATCGAGC GCTCATTTGC CGGGACACCT
TCGGCAATTG TTATGTCAGG AGACGCGAAT CTGATCGTTG TCCGGACCCT GGAAGGATTT
GTATACGGCG TTGATCGCAA CGGCTCTATC GTATGGAATG CATCCCTTGA ATCCGGATCG
CAGGGAATCG CGATCACCGA CACGGGAAAC AGTCTGGTTC TCGGGGATGG CAAGGCTATC
GCTATGTTCA ACATAACCGG GAATCGCCTG GATGAATATC CCGTTGACAG CGAAGTACGA
TCCATTGGTG TTTCTCCGGA CAGAAAATCC ATCATTATCG GAACTGAACA AAACCTGATC
GTTATCCCGG CCATGGAACC GGTTCCCCGT ACAGAAAGCA CGGCACTTAC GCCAATCCAG
ACCGTGCACG CTTCAGGTCA GGTTCCCCAA ACGCCAAAGG AGAGCTCAGT CTTCCCCATC
ATCCTGGTCT TTGCAGTGGG TTGTGGTATC GTGATTATGT TAAATCGAAA AGGAAAATTC
TGA
 
Protein sequence
MKKKITITVL FVILLTLFCS APVVGQSRTL QQTNDILLPL TSPSGNQSPL IHIADNGNLV 
TVNYPYDPNF FVYDGNGSFL WNATLSAEQS PWISSVSVAP DGQYLIVTQL VPACCHGSVT
NTSSNKVILF DRSGARSWEY PTYSPPLTST ISYDNQNIFI GMNDGRIINL DREGTACWTA
RVDAPVLSLT TSADSSTIVA TGESNYYSNK IYGEPLNPHD LFVLDKNGTL LWNYQTRGTN
TAAISDDGSV TAVLNERNGN LLLFNRTGGR QIERSFAGTP SAIVMSGDAN LIVVRTLEGF
VYGVDRNGSI VWNASLESGS QGIAITDTGN SLVLGDGKAI AMFNITGNRL DEYPVDSEVR
SIGVSPDRKS IIIGTEQNLI VIPAMEPVPR TESTALTPIQ TVHASGQVPQ TPKESSVFPI
ILVFAVGCGI VIMLNRKGKF