| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0358 |
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| Symbol | |
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| ID | 5411420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 351046 |
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| End bp | 353067 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640867572 |
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| Product | SMC protein-like protein |
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| Protein accession | YP_001403521 |
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| Protein GI | 154149903 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0988635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTAC ACTCACTTAC ACTCGAAAAC ATCCGAATTT TCAAAGGCAA AAATAGACTA
GATTTCACAC CGATCCTTAC TTCGGACGTA AAAAAACCTA TCATTCTAAT TGGAGGGAAG
AACGGTGCCG GGAAAACTAC TCTCTTCGAA TCCATTCTTC TCTGTCTCTA CGGTCAGCAT
GCCCCTGGCA GTTTGATGTC AAAAACAAAA TATGAGCAGT ACATCCGACA GATCGTTCCA
CGGAGTAAAA AATTAGAAGC CGAGCTTATT CCAGCAATTG AAATTGTGTT TGAATTTACT
CATTCGGGAA TACGAAACAC CTATGGTGTT CGACGTGAAT GGTCACTCGG GCCAAAATTT
TCCGAGAATT TGACAATCAC ATGCGAAGGA AGTATACTTT CAGAGCTCGA AAAGGACCAA
TGGCAGGATC TTCTCAATGA ACTCATCCCC CCCCGGTTTG CTCGACTCTT CCTGTTTGAC
GGGGAGAAGA TCCAGAACAT CGTAGATGAT AATGACGAAA ATAATTATCT TCAGGATTCT
TTCAAATCAT TGCTTGGCCT TGACATCGTT GACCATCTCA AAGCTGATTT AGGAATTTAT
TTAAGCCGTC ATCTAAGGAG TTCAGATATA AGTGCGATCA ATAAACAGAT GAAGGAAACT
ACTTCTGAAA TAGGGAAAAT CGAGGAAGAA AAGGAATATT TGGAACAGGA ACGCGCCAAG
GTCCAGGGCC AGAGTGAGAG AGTTCAATTG GAAATTGGAA AACAAGAACA ACTCCTTGCA
AGCGAGGGCG GTGGCTTCGC CCGAATACGA GATGATATGA AAGCCGAGAA GGTACGGCTT
GATCAATTTG TGGTAAAAAC GGAGAATGAG ATAAGTGAAT TATGTGAAGG TTTGTTTCCT
TTCGCGATAA CACCAAAATA CTGTGAGTCC CTTAAAAAAA CTCTGATTGA GGAGGACAAA
GTCCAGGCTC ATGCGCTTTC GCAAGAAATA ATTCATGCAA ATATTGAAGA ATTGAACAAA
ATCATTCAAT CCCCCGCCTT TTGGTCGGAT GTGTCTGTTC CCTCATCCCA GAAAGAAAAA
GTACGGGAGA AACTTGTCGA TCTAATGTAT CAGCACTTGG TTACTGATGA TAGCGTGAAG
AAAAAGAAGT TAGTTCATCA TCTTTCTCAA CACGAATACA AACAACTCCT GCAATGGATC
GAAGAGGCAA CGAAGACAAC TCCTAAGAAG ATGAAAGAGC TATCTGAACA ACTTGAGAAA
TTGACTGCAC AGCGCCTCAA GATTGCCGAA ATGATCAATA AGGCCCCTTC GGATGAGGTG
ATAGCTCCAC ATATCACTAA GCTCAATGAA TTAAATCAGA AAATTGGCCA ATGTTCCGAG
CAACTCAGGT CGATTAACGA ATCAATTCGA CAGATTGATC TACGACTAAA TGAGCTAAAC
CGCCAACGGA AAAAATTTGA GGAAGAAATT CAAGGAGCAA AGGGCGGCTC GATAAAGATG
GAACTTGCCC TGCAGGTCAC TACAGTTCTA AACGAATACG CAAAAGAACT CCAGAAACAG
AAGATCAATT ATCTCGGTGA TAATATCCTG TCATGCTTCA ACCGCTTGAT ACGGAAAGAC
GATTATGTCC AGAAAATTCT GATCGACGAG AATTACAATA TTATCTTGTA TGATGCCGAC
GGCAACACTA TTCCAAAAAA TCTACTCTCC GCTGGAGAGA AAGAGATCTT TGCCGTATCT
TTGCTTTGGG GGCTCACCCT TACTTCTGGA CGACAACTTC CATTTATCAT TGACACTCCA
CTTGGGAGGC TCGATAGCGA ACATCGAGGA AATCTTGTAA TGGATTTCTT CCAACATGCT
GGCGACCAAA TGATCATCTT CTCCACGGAT ACCGAGATTG ACAAGGAATA TTTCCGGATC
CTTCAGCCAC AGATTGCCCG GGCATATCAT CTCGACTATT CCAAGAAAGA GCGCCATACA
TCAATCTCAC CGGGCTATTT CTGGCAAGAG GTGGAATCAT GA
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| Protein sequence | MLLHSLTLEN IRIFKGKNRL DFTPILTSDV KKPIILIGGK NGAGKTTLFE SILLCLYGQH
APGSLMSKTK YEQYIRQIVP RSKKLEAELI PAIEIVFEFT HSGIRNTYGV RREWSLGPKF
SENLTITCEG SILSELEKDQ WQDLLNELIP PRFARLFLFD GEKIQNIVDD NDENNYLQDS
FKSLLGLDIV DHLKADLGIY LSRHLRSSDI SAINKQMKET TSEIGKIEEE KEYLEQERAK
VQGQSERVQL EIGKQEQLLA SEGGGFARIR DDMKAEKVRL DQFVVKTENE ISELCEGLFP
FAITPKYCES LKKTLIEEDK VQAHALSQEI IHANIEELNK IIQSPAFWSD VSVPSSQKEK
VREKLVDLMY QHLVTDDSVK KKKLVHHLSQ HEYKQLLQWI EEATKTTPKK MKELSEQLEK
LTAQRLKIAE MINKAPSDEV IAPHITKLNE LNQKIGQCSE QLRSINESIR QIDLRLNELN
RQRKKFEEEI QGAKGGSIKM ELALQVTTVL NEYAKELQKQ KINYLGDNIL SCFNRLIRKD
DYVQKILIDE NYNIILYDAD GNTIPKNLLS AGEKEIFAVS LLWGLTLTSG RQLPFIIDTP
LGRLDSEHRG NLVMDFFQHA GDQMIIFSTD TEIDKEYFRI LQPQIARAYH LDYSKKERHT
SISPGYFWQE VES
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