Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0351 |
Symbol | |
ID | 5411117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 341664 |
End bp | 343568 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640867565 |
Product | hypothetical protein |
Protein accession | YP_001403514 |
Protein GI | 154149896 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000201568 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.805939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTAA ACGATCCCTG CGGTTGGTCC GGATCTATTC ACACGTTTCT CTCGCTCTCT AAATCTGATT GGCTCTCGTC ATTGCAGGCA CATCATCAAC GATGCATGAA TTCTCCGGCA GATCAAAGTC AAATTCTCGC GTGGGATCAT TCGTTTGACA TTCTTCAACG AGAACTAAAA CAGCTCGTCC AGATCAAACC TGAAATTGGA AACTACTCGA TTATTTTTGA ATACGAATTG CCCCGTGAAC GGGGACGACG GCCAGATGTC ATTATTTTAG GCCCCTGTGT TTTCGTTTTG GAATTCAAGG ATTACGCTCA ACTGCTCCAA GCTCACAGCG ATCAGGTTGC GGCGTATGCT CGGGATTTGA AAAATTATCA TGCGGGCTCT CAACCGTATT GTGTTCTTTC ATTCCTCATT CTTGCACGGG CCAAGGATCA GATCACAGAT AATGAGAACG TGATTGTGCT TTCACCGGAT CATATCGTCG ATGTGTTTAC CCTTTCATCT GAATTGGAAG CAGGCCCGCT CATTGATCCG CGGGTTTGGA TCGCTGCAGA ATATTCCCCG CTGCCCTCGC TCATCGAAGC AGCCCGGACG ATCTGGAACA AGCAGCCATT GCCCCAGATC AAACGAGCGT TGAGCGCCGG CATTCCGCAG ACCATTGCTG AGTTGCTTTC CATTGCACAA GCGGCGAAGG CAAACAATGA GCTGCATCTT GCGCTTGTGA CCGGTGTGCC TGGGGCGGGA AAGACGCTTG TTGGGATTCA ACTGGTGTAT GAGAATCATC TGGAAGGTTC CGACCTCCAG AATACCGCAG TGTTTCTCTC GGGCAATGGT CCTTTGGTGA AAGTCCTTCA ACATGCCTTG AAATACAAAA TTTTTGTGCA AGACGTTCAT GGATTTTTGA AGGAGTATGG CGGGGAGACG GCAAAGATTC CCCATGAACA CATCTGGGTC TATGATGAAG CGCAACGGGC ATGGGATGCT GAGCGGGTGA GTGAGAAGCG AGGCCATGCC ACGAGTGAGC CGGAAGATTT CTTGCGAATA GCGGAACGGA TGAACTCGTG GGGTTTGATG GTCGCGCTCA TTGGCGAAGG CCAGGAGATC CATCTTGGAG AAGAATCGGG ATTACCGCAA TGGAATGATG CACTCGCCAA AATGCAGAAG CCGTGGATCG TTCATTGCCC CAAGAAAATT GCTGGAACCT TTACCGCAGC AAAAAAATTG GCAACAAGCG ATGTCCTCGA TCTCTCCGTC TCTCTTCGGT CCCATCTGGC CGAAGATGTC GCCCAATGGA TCTCTGCCCT ACTCGAAGGC GATCTCATTC ATGCGAAAAC CTTGTCCGAA AGCGTCACCA GCCAAGGCTT TGACGTTTAC CTCACACAGG ACATCAATGT TGCAACGAAT TACGTGAAGG AGCGATACAA GGATCAAGAG GACAAACGCT ACGGCCTCCT CGCATCCTCA AAGGCGAAGA ATCTCCCCAC GTGGGGCATC CACAACGAAT ACAATTACAC CAAGAATATG CGAGAAGGAC CGTGGTACAC CGATCCCCCC TCATCATTCA ATTCCTGCTG TGCGTTCCGT GATGTTGCAA CGGAGTTCTC GTGTCAAGGG CTGGAATTGG ATTTCCCGAT TGTCTGTTGG GGAGATGATT TTGTCTGGGA TGGCATCTGG AAGAGTCCCC CGGCGAAACG CTCGAAGGCG AAGGACCCGC ACCAGTTGCG GGTGAATAGT TATCGGGTGG TGTTGACCCG GGGCCGGGAC GGATTCATTG TGTTTGTGCC ACCGGAGATT GGGATGCAGA GTACGTACGA GGCGTTGAAG GGGGCGGGAG TGAGGGAGAT TACCGAGGTT AATACGAAAG ATTTGATTGT GAAGGATGGG GCGGGTGTTG TATGA
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Protein sequence | MTLNDPCGWS GSIHTFLSLS KSDWLSSLQA HHQRCMNSPA DQSQILAWDH SFDILQRELK QLVQIKPEIG NYSIIFEYEL PRERGRRPDV IILGPCVFVL EFKDYAQLLQ AHSDQVAAYA RDLKNYHAGS QPYCVLSFLI LARAKDQITD NENVIVLSPD HIVDVFTLSS ELEAGPLIDP RVWIAAEYSP LPSLIEAART IWNKQPLPQI KRALSAGIPQ TIAELLSIAQ AAKANNELHL ALVTGVPGAG KTLVGIQLVY ENHLEGSDLQ NTAVFLSGNG PLVKVLQHAL KYKIFVQDVH GFLKEYGGET AKIPHEHIWV YDEAQRAWDA ERVSEKRGHA TSEPEDFLRI AERMNSWGLM VALIGEGQEI HLGEESGLPQ WNDALAKMQK PWIVHCPKKI AGTFTAAKKL ATSDVLDLSV SLRSHLAEDV AQWISALLEG DLIHAKTLSE SVTSQGFDVY LTQDINVATN YVKERYKDQE DKRYGLLASS KAKNLPTWGI HNEYNYTKNM REGPWYTDPP SSFNSCCAFR DVATEFSCQG LELDFPIVCW GDDFVWDGIW KSPPAKRSKA KDPHQLRVNS YRVVLTRGRD GFIVFVPPEI GMQSTYEALK GAGVREITEV NTKDLIVKDG AGVV
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