Gene Mboo_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0344 
Symbol 
ID5409988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp335604 
End bp336407 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content59% 
IMG OID640867559 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001403508 
Protein GI154149890 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGG TTATCTACTA TTTCACCGGC ACCGGAAACT CGCTTGCCGC GGCAAAAAAG 
ATCGCAGCAG ACCTTGGGGA CTGCGAACTT GTTCCCATTG TATCGTTTAA GGATACCACT
GAGGACATTG TCCCGCCGGC AGTACGTGTC GGGATTGTCT GCCCGGTGTA TGACGCTGGC
CTTCCCGTGA TCGTTTGGGA ATTTGCACAA CGGCTCAGCC TCGCAGGCAC CCGGTACGTC
TTTGGCATCG TAACCCTGGG CGGGTCAGGA GGGACCGCTG CATTGCGGCA GCTCGACCAG
AGCGTAAAAC AACAAAACGG CCGCGGACTT TCTGCCGCAT TTTCCGTACG GATGCCCGGC
AATTTCCCGC CGGTAAGCCG GCCCCCGCAG GGGAAAAAGA AAGACGGGAT CCTTGCCGGT
GCAGATGCAC AGCTAAAAGA GGCGGCCGGC CGGATAAAAA AAGGCGAACA GGTCCCGCCC
GGATTCTCGC CGTTTGCGTG GCTCATGCAC GCTGCCACCT ACCGGTTTTT TTCCGGGTCG
GTCCATGCCG GGGACAAGGA CTTTTCTGTC TCTTGCGCCT GCACCTCCTG CGGTACCTGT
GCAAAAGTCT GCCCGGTGGG AAATATCAGA ATGGAACAGG GCAGGCCGGC CTGGCAGCAC
CATTGCGAGT TCTGCTGTGC CTGTCTCCAT TTCTGCCCGG TCGAGGCGAT CGATCTCCAC
AGCATGCGGG GCACAAAAGG ACGGGGACGG TACCGCCACC CGGCCGTAAC GCTGGAAGAC
ATGAAGGTCC AGGCAGGAAG ATAA
 
Protein sequence
MKTVIYYFTG TGNSLAAAKK IAADLGDCEL VPIVSFKDTT EDIVPPAVRV GIVCPVYDAG 
LPVIVWEFAQ RLSLAGTRYV FGIVTLGGSG GTAALRQLDQ SVKQQNGRGL SAAFSVRMPG
NFPPVSRPPQ GKKKDGILAG ADAQLKEAAG RIKKGEQVPP GFSPFAWLMH AATYRFFSGS
VHAGDKDFSV SCACTSCGTC AKVCPVGNIR MEQGRPAWQH HCEFCCACLH FCPVEAIDLH
SMRGTKGRGR YRHPAVTLED MKVQAGR