Gene Mboo_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0271 
SymbolargS 
ID5412224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp253475 
End bp255151 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content57% 
IMG OID640867487 
Productarginyl-tRNA synthetase 
Protein accessionYP_001403436 
Protein GI154149818 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGTGG ACACGACAGC GGCAATAAAG AGGGCACTTT CCGAATGCAC GGGACTCGCG 
GAGATCCCGC TTGTTGACGG TGGCGAACAT GCAGACCTTG CAACGACCGT CGCGTTCGCT
CTTGCAAAGA CAAAAAAACA GGCACCGGTG AAGATCGCGC AGGACGTTGT CGCGGCGCTC
AAAAACAACC GGGAACTCTC TGACCTTGGC GTGACGGTCG AGGCAAAAGG CCCGTATATC
AATTTCGTCT TCGGGAGCGC CTACGTGACT GCGGCACTGA AGGCTGCAGT GCAGCCGGGG
TACGGCTCCT TCCCGGCAAA GGAATCTCCC CGGATAGTAC TTGAACATAC AAGCGCAAAC
CCCAACGGTC CGCTCCATGT GGGCCACATC CGGAACTCGA TCATCGGTGA TTCGCTTGCC
CGGGCGTTCA GGAAGGCCGG CTACCCGCTC GAAGTTGAAT ATTATGTCAA CGACATGGGC
CGGCAGATAG CAATTGTCAC GTGGGGCTTT GACCACCTCG AACATGGGCA GCACGAGAGC
GAGAAAGAGG ATGCCCACAT TGCGCGGGTC TACATTGCGG CCAACCGGGA GATCGAAAAG
GATCCCGGGA TCACAAAGCA GGTCGACAAG CTTATGGAAC TTGTCGAGAG CGGCGATCCT
GAGACCGTGA AGAAATTCCG GCGCGAGGTC TCCCGCTGTC TTGACGGTTT TGCGGTTACC
TTAAAAAATC TCAACGTGAA GCACGACCGC TTCGTCTGGG AGAGTGACTT TGTGAAAAAC
GGCGACACAA AGGCTGTCAT CGCAAAGATC GAAAATCTCC CGCAGGCAAC CCATGAAGGT
ACGCTCCTTG CTCTTGACCT TGCAGAATTC GGATTTACCA ACAAGTACGT GATGCGGCGG
AGCGATGGTA CCTCGGTGTA CGCGGCCCGC GACCTTGCCT TCCATACGTG GAAGAACCAA
AACTTCGACC GTGCGATCGA TGTGCTGGGC GCCGACCACA AGCTGATCGG GGCGCAACTC
CAGTGCACTA TGCAGCTGCT CGGCGAGAAG GCCCCGGAGA TCGTGCACTT CGAATTTGTC
TCGCTTCCTG AAGGCTCGAT GAGCACCCGG GCCGGGAAGT TCGTCTCGGC CGATGAATTG
ATCGATGAAG TGACCAAACG TGCCTTTGAC GAGGTCACCA CACGGAGGCC GGAGCTGGAT
GAGGCTACCC GCAGGAATAT CGCAGACTCC GTTGCCCGGG CCGGTATCCG GTACGATATC
GTGAAGATCT CGCCCGAGAA GAGCACGGTC TTTGACTGGA AGCAGGCGCT GGACTTCGAG
CGCCAGAGCG GGCCCTATAT CCAGTACGCC CACGCCCGTG CGTGCAGCAT CCTTGAAAAA
GCCGGTGCTT TTGAGGAATG CTATGATCTC GCGACCGAAC AGGAGATCAT CCTCGCAAAG
AAGATCGCAA AGTTCCCGAG CGTGATCGAG AAAGTGGTTA CCGAGCTCCG CCCGCACCTG
CTTGCCACCT ATGCCCACGA ACTGGCAGAC ACCTTCAACA CATTCTACCA CTACGAGCCG
GTCTTAAAAA GTGAGGGCGA AGTGAGGGAC CGTCGCCTTA CTCTCGTAAA AGCCGTGCAG
AACACCCTAC AAGAGTCCCT TGAGACGCTT GGGATCGATG CCATCCACAC CATGTGA
 
Protein sequence
MVVDTTAAIK RALSECTGLA EIPLVDGGEH ADLATTVAFA LAKTKKQAPV KIAQDVVAAL 
KNNRELSDLG VTVEAKGPYI NFVFGSAYVT AALKAAVQPG YGSFPAKESP RIVLEHTSAN
PNGPLHVGHI RNSIIGDSLA RAFRKAGYPL EVEYYVNDMG RQIAIVTWGF DHLEHGQHES
EKEDAHIARV YIAANREIEK DPGITKQVDK LMELVESGDP ETVKKFRREV SRCLDGFAVT
LKNLNVKHDR FVWESDFVKN GDTKAVIAKI ENLPQATHEG TLLALDLAEF GFTNKYVMRR
SDGTSVYAAR DLAFHTWKNQ NFDRAIDVLG ADHKLIGAQL QCTMQLLGEK APEIVHFEFV
SLPEGSMSTR AGKFVSADEL IDEVTKRAFD EVTTRRPELD EATRRNIADS VARAGIRYDI
VKISPEKSTV FDWKQALDFE RQSGPYIQYA HARACSILEK AGAFEECYDL ATEQEIILAK
KIAKFPSVIE KVVTELRPHL LATYAHELAD TFNTFYHYEP VLKSEGEVRD RRLTLVKAVQ
NTLQESLETL GIDAIHTM