| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0269 |
|---|
| Symbol | |
|---|
| ID | 5412222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 251268 |
|---|
| End bp | 252164 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640867485 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403434 |
|---|
| Protein GI | 154149816 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCACAC TCCTGATCGC AGCGGGCCTT GCCTGCCTTG TCGTGCTTGC AGCCTGTGCC
GGGTGCATGA GCTCAACAAC CCCTCAACCC ACATACACTG TGGATAACAA TGGCGTCCTC
TCAGTCACCT GCGCACCGGT CACCACCAAC GAGACCGTCC TTTTTTCAAA CGAGACCTAC
ACCGAATCAA AGATCATTCT CCACACTCAG ACCGGCGATG TGACCACCTA CCTGAGCTAC
CCCGAAGATC CCAAGGCAGT TCTGCTGTAT CTACCGGGAG CAGGGGAGAA GATTTCCGGT
CACGCAGGGC GGATGGTCCA GTACGCAGCG GACGGTTATG CCTTCATGTT CCTCGATTAC
CGCGGCCGTG GCGGGGAAAC AACCGGGTAC CCCTTCAACC CCAACACGGA TTACGCGCTC
TTTGAGAACA AGGAATGGCC CGAGTACTAC CAGACCATCT GCGACATCTC ATCGGCCCAG
GCCCTGCTCT CATCCCGGTT CAATGTCCCG GTCTATGCAA TGGGGGGCAG TAACGGCGGC
CGGTATGCAG CGGTAGCAGC AGGGGTTGAT AAGAACTTTG CCGGGTATAT CGGTATTTCC
ACCGCAGACT GGGGATTGAA GGATCAGGTA CTCTCACAGG GAGGGTCGGG AGATATCCTC
CGGTTTGCCG AATCGCTGGA GCCCAGTACG TACCTCCCCA CAATCTCGCC GCGCCCGGTC
TGGATGTACC ACAATGCAAC CGACCCGATT ATCCCGTTCG CAGATGGGCA GGCTCTGTAC
GCAACCGCAA ACAAGCCCAA GAACTTCACC GAATTTAACG GGGACCATGG GATCAACCCG
GATGTAGACA ACCGGCTTAT GGCCCTCTTG GCGCAAATTT ATGGCACGCA AGCGTGA
|
|---|
| Protein sequence | MRTLLIAAGL ACLVVLAACA GCMSSTTPQP TYTVDNNGVL SVTCAPVTTN ETVLFSNETY
TESKIILHTQ TGDVTTYLSY PEDPKAVLLY LPGAGEKISG HAGRMVQYAA DGYAFMFLDY
RGRGGETTGY PFNPNTDYAL FENKEWPEYY QTICDISSAQ ALLSSRFNVP VYAMGGSNGG
RYAAVAAGVD KNFAGYIGIS TADWGLKDQV LSQGGSGDIL RFAESLEPST YLPTISPRPV
WMYHNATDPI IPFADGQALY ATANKPKNFT EFNGDHGINP DVDNRLMALL AQIYGTQA
|
|---|
| |