| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0217 |
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| Symbol | |
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| ID | 5411817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 206309 |
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| End bp | 207139 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640867431 |
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| Product | tRNA pseudouridine synthase ACD |
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| Protein accession | YP_001403382 |
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| Protein GI | 154149764 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAAG TTAAAGAGAC TGACCCGGCG GCTCCGCTTC CGGTAAGGCT CGCATGCCGG
GTCTCGTACC TGGGCACCCG GTTCTACGGT TCGCAGCAGC AGGAGTCCAG CCGCACGGTT
GAAGGCGAAT TCATCGAAGC GTGCCGGCGC CTGGCTCTCT TTTCTGACTG GCGGACTGCG
GGATTTGCGT CAGCAGGCAG GACCGATCGC GGGGTGCATG CCTGCGGTCA GGTGATCGCG
TTCTCCACAC AAACCCCGGA CCGGGCCCGG CAGGCGCTCA ACAGCCAGCT GCCGCCTGAT
ATCTGGTGCA CGGCAACCGC AGTTGTTCCT GACCATTTCC ATCCCCGGTA CGATGCCCGC
TCACGCACGT ACCGGTATTA TTTTGGTGAA CCCCCCCGGG ACCCGGTAGC CATGGAAACG
GCAGCCCGGG AATTTTCAGG CGATCACAAT TTCACCAATT TTGCCCGGGT CGGGGACAAG
AACCCGTGGC GGAAGATCCT AGAGATACGG ATCGGAACGG AAGGGAGTTT CACGTACCTT
GAGGTGAAGG CCCAGAGTTT CCTCTGGCAC CAGGTACGGT GCATGGCGGC AGCGGCCCTC
TCGGCCGGCA TGGGCGAACA GGATGCGGAC GGGATCCGGT TGCTGCTCAA CGAGGCAGCA
AGCCGGCCTA TCCAGCCGGC ACCGGCCGAA GGCCTTGTAC TCTGGGACAC GGACTGCGGG
CTTACCTGGG ATCCGGTGGG AAAGAGCCCG AGGAGCTGCA CGTATTGTAC CGAGCTCCGG
CGCCATCATG CGCTCATGGA GCAGGTCTGC CGGGTGCTTG GTCCGGAATA A
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| Protein sequence | MEKVKETDPA APLPVRLACR VSYLGTRFYG SQQQESSRTV EGEFIEACRR LALFSDWRTA
GFASAGRTDR GVHACGQVIA FSTQTPDRAR QALNSQLPPD IWCTATAVVP DHFHPRYDAR
SRTYRYYFGE PPRDPVAMET AAREFSGDHN FTNFARVGDK NPWRKILEIR IGTEGSFTYL
EVKAQSFLWH QVRCMAAAAL SAGMGEQDAD GIRLLLNEAA SRPIQPAPAE GLVLWDTDCG
LTWDPVGKSP RSCTYCTELR RHHALMEQVC RVLGPE
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