Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0197 |
Symbol | |
ID | 5411522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 189975 |
End bp | 190523 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640867412 |
Product | hypothetical protein |
Protein accession | YP_001403363 |
Protein GI | 154149745 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.251109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGC CTGCCCCCAC CATCACCGGA ACCGATCAGG GTTCAAAGAA GCGTTGGATC GCGAACATGT TCACTATCAC CCGGCTCCTG GTCATCTTAG CGATCACCGG GCTGTTTATT GCAGCAGTGA TCGTGATCAC CTACGGCTTT GTAGAGCTCT TCCGGATCGT GGTGCACGTG AGCGGGATAG GCTTCATGAA CGAAGGGGCG GGAAAATATC TCTCGGTGAA CATGACCGAG ATGATCGACC TCAACCTGAT CGGCATTGTG CTTGTGATCA TGGCCATCGG CCTCTTCCAG CTCTTCATTA AGCCCGATAT CCGCCTGCCT AAATGGCTGG ATACCCCGTC GCTCGATGCC CTCAAGGAAC GCCTGCTGGT GGTGATCGTG GTGCTCCTCC CGATCATCTT CCTGGGCTTT GCCGCCACGT GGTCGGGGGG AATCGATATC GCCGCCATCG GGTTTGCCAT CGCACTCGTG ATGATTGCCA CCGGGTATAT CCTGAGCATT GTCGGGCGGT TTAAGAACGA GACCAAAGGG CCGGATTAA
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Protein sequence | MNEPAPTITG TDQGSKKRWI ANMFTITRLL VILAITGLFI AAVIVITYGF VELFRIVVHV SGIGFMNEGA GKYLSVNMTE MIDLNLIGIV LVIMAIGLFQ LFIKPDIRLP KWLDTPSLDA LKERLLVVIV VLLPIIFLGF AATWSGGIDI AAIGFAIALV MIATGYILSI VGRFKNETKG PD
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