Gene Mboo_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0197 
Symbol 
ID5411522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp189975 
End bp190523 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content56% 
IMG OID640867412 
Producthypothetical protein 
Protein accessionYP_001403363 
Protein GI154149745 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.251109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGC CTGCCCCCAC CATCACCGGA ACCGATCAGG GTTCAAAGAA GCGTTGGATC 
GCGAACATGT TCACTATCAC CCGGCTCCTG GTCATCTTAG CGATCACCGG GCTGTTTATT
GCAGCAGTGA TCGTGATCAC CTACGGCTTT GTAGAGCTCT TCCGGATCGT GGTGCACGTG
AGCGGGATAG GCTTCATGAA CGAAGGGGCG GGAAAATATC TCTCGGTGAA CATGACCGAG
ATGATCGACC TCAACCTGAT CGGCATTGTG CTTGTGATCA TGGCCATCGG CCTCTTCCAG
CTCTTCATTA AGCCCGATAT CCGCCTGCCT AAATGGCTGG ATACCCCGTC GCTCGATGCC
CTCAAGGAAC GCCTGCTGGT GGTGATCGTG GTGCTCCTCC CGATCATCTT CCTGGGCTTT
GCCGCCACGT GGTCGGGGGG AATCGATATC GCCGCCATCG GGTTTGCCAT CGCACTCGTG
ATGATTGCCA CCGGGTATAT CCTGAGCATT GTCGGGCGGT TTAAGAACGA GACCAAAGGG
CCGGATTAA
 
Protein sequence
MNEPAPTITG TDQGSKKRWI ANMFTITRLL VILAITGLFI AAVIVITYGF VELFRIVVHV 
SGIGFMNEGA GKYLSVNMTE MIDLNLIGIV LVIMAIGLFQ LFIKPDIRLP KWLDTPSLDA
LKERLLVVIV VLLPIIFLGF AATWSGGIDI AAIGFAIALV MIATGYILSI VGRFKNETKG
PD