| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0179 |
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| Symbol | |
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| ID | 5410223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 175371 |
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| End bp | 176621 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640867394 |
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| Product | nucleic acid binding, OB-fold, tRNA/helicase-type |
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| Protein accession | YP_001403345 |
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| Protein GI | 154149727 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0258267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTATT CCGAAGCAAC CGAGAGAATC TCCCGAAAGT ATGCAAAAAC CGGCCACGAG
ATTGACCGCC AGAAGATCGA AGGCAAGCTG CGCAGGCTTG TCGAGGAGTT CGGTGTCCAG
CCGGCCGAAG CAGAGCGCAG CGTGACAAAC GAACTGAATA AGGAGTTCAA CATCACCCCT
GCGGGAGTGC CAGGAACTCC CGGCCCGGCT GGCGGGGCGA CAAGCGAGAA GAAGATCGCC
GATGCCCGGC CCGGGGACTG GGTGACCATC GAAGGCAAAG TGGTCTCCCT TTCCGCGCCC
GCATCGCCGG CAATAGCCCA GAGTGGGATC CTCGCCGACG AATCGGGCGC AATCCGATTT
GTGGTCTGGG CCAAGTCCAA TGCGCCAAAG ATGGACGAAG GCGCGTGGTA CCGCCTCGAC
TCGGCCGTGG TAGACGAGTA CAAGAATATC CCCAATCTCA AGGTGCATTC GGGGACCACG
ATCACCGCAA TTGACCGGAC CGACCCGCTC ATCCCCGCAC CCTGTGCCAT AAAAGACCTG
CACCCCGGCA TCGGGAGCGT CCGCGCGAAA GTGGTCCAGG AATGGGACAC AACCCACGAC
CGGATGCTCC AGTCCGGCCT TATAGGTGAC GAGACCGGCA CGGTGAAGTT CATCATCTGG
AAGGAGCAGG GAAAGGAGAA ACTTGCCGTG GGCGCGGTAT ACTCGATCTT CTATGCGCAG
GCCGACGAGT TCAACGAACG GCTCTCGCTC AACATCACGG GCGCGGCCAT CATGCAGGAG
GAAGGCGATA TTGCCACCGT CACCGGTGGC GACACCGAGG TCCGCGGGGC ACTTGTCCAC
ATTGCGCCCG GCTCGGGGAT CATTAAGCGC TGCCCGGTCC CGGGCTGCAA CCGTGCCCTC
TCCCGGCAAA ACTACTGTCC GATCCACGAG ATCCAGCCCC GGTTCGAGTA CGACCTCCGG
ATCAAGGGAT GGCTGGATGA TGGCGAAAAG ACGCACAACA TCCTCCTCAA GCGTGACGTG
GTGGAACCAC TGACCGGCAT GACACTCGAC CAGGCAAAGG AGATCGCAGA GAACAACCCG
CTCGGGATGG ACGAGGTCTT TTTGCAGATG CGCGACCGCG TGCTGGGACG GTACGTGGTG
TGCAAGGGCC GGGAGATCGA GAACCGGCTG CTCGTAAACA CCTGTGAGAA GATGCACTTT
GAGAGCGGGG AGCATGCAAA GCTCCTCAAC CGCGCCGGGG GTGCCTCATG A
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| Protein sequence | MDYSEATERI SRKYAKTGHE IDRQKIEGKL RRLVEEFGVQ PAEAERSVTN ELNKEFNITP
AGVPGTPGPA GGATSEKKIA DARPGDWVTI EGKVVSLSAP ASPAIAQSGI LADESGAIRF
VVWAKSNAPK MDEGAWYRLD SAVVDEYKNI PNLKVHSGTT ITAIDRTDPL IPAPCAIKDL
HPGIGSVRAK VVQEWDTTHD RMLQSGLIGD ETGTVKFIIW KEQGKEKLAV GAVYSIFYAQ
ADEFNERLSL NITGAAIMQE EGDIATVTGG DTEVRGALVH IAPGSGIIKR CPVPGCNRAL
SRQNYCPIHE IQPRFEYDLR IKGWLDDGEK THNILLKRDV VEPLTGMTLD QAKEIAENNP
LGMDEVFLQM RDRVLGRYVV CKGREIENRL LVNTCEKMHF ESGEHAKLLN RAGGAS
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