| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0015 |
|---|
| Symbol | |
|---|
| ID | 5411529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 11102 |
|---|
| End bp | 11920 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640867229 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_001403182 |
|---|
| Protein GI | 154149564 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCA TCCTTGTTAA CCAGGATCTC TGCACCCGGT GCGGGATCTG TGCCATTGTC
TGCCCGATGG GGATTGTCTC CCCCGCTGGT GAGAATACCC TGCCAAAAGT CCCGGACGAA
AAGGCCGGAG CCTGTATCCG CTGCGGTCAC TGCGAAATCC ATTGCCCGTC GCAGGCACTT
TTGCTGAACT GCCTCATCGA TGAGAAGGGT ACCCTCCCGG CGGGTGCCGG AGCGATCTCA
AAAGAAGATC TCGGCCCCTA CCTCAAAAAA CGCCGTTCCG TGCGCCACTT CACCAAAGAG
CTCGTACCGC AAGAGACGGT TGCCGGGATC CTTGATGTGG CCCGGTACGC CGCCTCCGGA
GGGAATGGCC AGCCGGTAGG ATGGCTGGTT ATACTGGACC CAAAAAAAGT TCATCGGCTT
GCCGGGCTGG TTGTCGACTG GATGCGTACG CTTGAAAACA GCAGCCACCC GATGAGCGGG
TATGTCCCCG GCCTCATCGC CGCGTGGGAT GCCGGGATGG ATCCGGTCTG CCGCGGGGCC
CCCCATCTCG TGGTTGCTCA TATCCCGGAG GGTAACCCGA TCGCCCCGGT GGACGCCATC
ATTGCGCTTA CCCATTTCGA CATTGCCGCG CCGGCATTCG GCGTGGGAGC CTGCTGGGCC
GGTTTCTTCT CAATGGCAGC ACGATCCTAT GAGCCGCTTA AAGAAGCCCT CGCGCTCCCC
CCGGGGCGTG AGTACTCGTA CAGCCTCTTC TTTGGTTACC CGCAGTACAA GACCTATGGT
ATCCCGCGCC GGAACCCGGT GCTGGTGGAA TGGAGATAG
|
|---|
| Protein sequence | MTTILVNQDL CTRCGICAIV CPMGIVSPAG ENTLPKVPDE KAGACIRCGH CEIHCPSQAL
LLNCLIDEKG TLPAGAGAIS KEDLGPYLKK RRSVRHFTKE LVPQETVAGI LDVARYAASG
GNGQPVGWLV ILDPKKVHRL AGLVVDWMRT LENSSHPMSG YVPGLIAAWD AGMDPVCRGA
PHLVVAHIPE GNPIAPVDAI IALTHFDIAA PAFGVGACWA GFFSMAARSY EPLKEALALP
PGREYSYSLF FGYPQYKTYG IPRRNPVLVE WR
|
|---|
| |