| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0011 |
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| Symbol | |
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| ID | 5412094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 8438 |
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| End bp | 9136 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640867225 |
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| Product | MIP family channel protein |
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| Protein accession | YP_001403178 |
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| Protein GI | 154149560 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGATT ATAAAAAATA TCTTGCTGAA TTCATCGGAA CTTTTGTCCT TGTTTTCATC
GGAACCGGAA GTGCTGTTGT CGCCGGGAAA GAGATCGGAT TTCTCGGTAT CGCTCTTGCC
TTTGGCCTGT CGGTCCTTGT CATGGTCTAT GCAATCGGGC AGATCTCCGG GTGTCATATC
AACCCGGCAA TCACGATTGC GATGCTTGCC AACGGGAAGA TCGGGTCTAA GGATGCTGCG
ATGTATATAA TTGCACAGTG CATCGGCGCC ATTATCGCAT CACTTGTCCT GCTTTCTATC
ATGACCGGCC TGCCGGGATA TAGTCTCGCC ATAAACGGCC TTGGCCAAGA CGGGTACGGT
ATTGCCTCCC CGGGAGGATT CCCACTCATG TCAGGCTTTA TTGCGGAGGT TGTCCTGACA
TTTATCTTCC TGATGGTGGT CTTTGGTGCA ACCTGTAAGA AGGCCCCGGC CGGCTTTGCC
GGGATTGCCA TCGGTCTTTC CCTTGCCATG ATCCACATGG TCGGAATCCC GATCACCGGT
ACATCCGTGA ACCCCGCCCG GAGCCTGGGC CCGGCACTGG TGGTCGGTGG GACCGCCCTT
GCCCAGCTCT GGATGTTTAT CCTTGCACCG ATCATCGGGG CGCTCGTGGC GGCAATAGTC
TGGAAATATC TCTTTGAGGA AACAATGTCC CCGGCATAA
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| Protein sequence | MCDYKKYLAE FIGTFVLVFI GTGSAVVAGK EIGFLGIALA FGLSVLVMVY AIGQISGCHI
NPAITIAMLA NGKIGSKDAA MYIIAQCIGA IIASLVLLSI MTGLPGYSLA INGLGQDGYG
IASPGGFPLM SGFIAEVVLT FIFLMVVFGA TCKKAPAGFA GIAIGLSLAM IHMVGIPITG
TSVNPARSLG PALVVGGTAL AQLWMFILAP IIGALVAAIV WKYLFEETMS PA
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