Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4044 |
Symbol | |
ID | 5387129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4553463 |
End bp | 4553798 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640867073 |
Product | IS3 family transposase orfB |
Protein accession | YP_001402989 |
Protein GI | 153948225 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTAAAGC CGTCTCAACG GCGCGAGATG GCACAACACA TGGTTGTCAC TAAGAATATC AGTATCAGCC TTCAGTTTCA GGAATGGGCG ATAAAGCATC AAATAACGTT ACTTTATATT CAGACGGGTA AGCCACAGCA GAATGCCTAT ATAGAGCGAT TTAATCGTAT AGTTTGTTAT GACTGGTTAA ACCAATATGC ATTTAGTTAT ATTGACGAGG TACGGAATTT TGCCACTTGC TGGTTGTGGA GCTATAACCA TGAACGTCCA CACATGGGGC TGGGTGGTAT AACACCGATG CAAAAACTGG CATTGAGCAC AAATATTCTA CTATAA
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Protein sequence | MVKPSQRREM AQHMVVTKNI SISLQFQEWA IKHQITLLYI QTGKPQQNAY IERFNRIVCY DWLNQYAFSY IDEVRNFATC WLWSYNHERP HMGLGGITPM QKLALSTNIL L
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