Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3815 |
Symbol | epaO |
ID | 5388251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4299595 |
End bp | 4300557 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640866839 |
Product | type III secretion system protein |
Protein accession | YP_001402769 |
Protein GI | 153950005 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGACGA ATCTGACGCC TGAGTTACGC GCCCTTAGCA CCTTGATCGG GAGTGGCCGG CAGACAGCAG GGGTGTCGGT GGCCTTGACG GAGATTGACG GTGAGGGCGT TTATCTGCCA CTGCATTATG GCGGCCAAGA GTGTGGGTTG TGGTTATCAC AATCCTGTTG GCAGCACTGG CTGAACACGA CGTTGGCAAC CGATAACCCC CAGTTGTTGG CCGCAGAGTT AGTGATCGCC ATGGCTAATT GGGCCGTCAC CCCATTGTTA GCGCCGTTTA CCGATCTGGT GGTATTGGCC GAGTCACCAC AGAAGAGGTC ACTACCAAAG CAGTGGGCGG TGACGGTGGC TTTCGAGCTG GAGGGACAGC CGATTATCGG TGTGTTACAG GATTGGCCGC AGGCGGCATT GGCCGACACT TTGTCTCATT GGCCGTGCGA AGCGGTCACC GCCCCTGATT TGCTTTGGCA ATCTGGATTG GTGGCGGGTT GGTGCCACTT ATCATTGCGT CAATTACAGC AGTTAAGGCC GGGCGAGGGT TTACGCCTCT CTATGGCGGC GGAATTGGAT AAAGAAGCGT GCTGGTTATG GCATCACGCA TCGCCACAAA TTTATATCAA GCTAGAGGGT GGGAACAGAA TGACAATTCA ACAGATTAAT GAAGCGAGTG ACCCGCTGGC CTGCGGCAGT CGCGCTGAAT CACTGCCTTT GGCGGCGGTA CAATTTGAGG ATTTACCGCA AACGCTGGTG ATGGAAATTG GCCGTTTGAC CTTGCCTCTG GGGGAGATAA AACAACTCGC GGTTGGTCAG ACGCTGGCGT GCCAAACCCA CTGTTATGGC GAGGTGAATA TCTGCCTGAA TGGGCAATCC GTTGGCCGTG GCAGTTTACT CCGGTGCGAT GAACAACTGG TGGTCAGAAT TGCACAATGG GGATTACAAA ACGGCGAAAA TATCATGGAA TGA
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Protein sequence | MLTNLTPELR ALSTLIGSGR QTAGVSVALT EIDGEGVYLP LHYGGQECGL WLSQSCWQHW LNTTLATDNP QLLAAELVIA MANWAVTPLL APFTDLVVLA ESPQKRSLPK QWAVTVAFEL EGQPIIGVLQ DWPQAALADT LSHWPCEAVT APDLLWQSGL VAGWCHLSLR QLQQLRPGEG LRLSMAAELD KEACWLWHHA SPQIYIKLEG GNRMTIQQIN EASDPLACGS RAESLPLAAV QFEDLPQTLV MEIGRLTLPL GEIKQLAVGQ TLACQTHCYG EVNICLNGQS VGRGSLLRCD EQLVVRIAQW GLQNGENIME
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