| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3814 |
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| Symbol | epaP |
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| ID | 5386403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4298818 |
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| End bp | 4299468 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640866838 |
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| Product | type III secretion system protein |
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| Protein accession | YP_001402768 |
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| Protein GI | 153950632 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAC TGAATTCATC CTATCAATTG ATCGCCCTGC TTTTCATGCT GTCCGTGTTG
CCTTTGCTGG TGGTCATGGG GACCGCATTC CTTAAGCTAT CCGTGGTTTT TTCGTTGTTA
CGCAATGCGC TGGGTGTTCA ACAAGTGCCA CCGAATATTG CCATTTACGG GCTGGCGCTG
GTGCTGACTA TTTTTATCAT GGCACCGGTT GGTTTAGATG TTCAGGCGCG CTTGCAAAAT
GAAGAGCTGT CCAATGATAT CGGCGCATTA GCGCACCAAA TTGATCAAAA TGCGCTGGTG
CCCTACCGCG ATTTTTTACA GCGTAATACC GATATTGAGC AAGTCACTTT TTTTAACGAC
ATTGTGCAGA ATAAGTGGCC TGAGCGTTAC CGCGATAGCG TCAAACCCGA TTCACTGCTG
ATATTAATGC CCGCCTTTAC CCTCAGTCAG CTTAATGAAG CGTTTAAAAT CGGCCTGTTA
CTTTTTTTAC CGTTTGTCGC CATCGATTTA ATTGTATCCA ACATCTTGCT GGCGATGGGC
ATGATGATGG TGTCACCCAT GACCCTGTCA TTGCCGTTTA AACTGTTGGT TTTCGTCCTG
GTGGATGGCT GGTCATTGGT TCTCGGACAG CTTGTAGGTT CCTATTTATG A
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| Protein sequence | MELLNSSYQL IALLFMLSVL PLLVVMGTAF LKLSVVFSLL RNALGVQQVP PNIAIYGLAL
VLTIFIMAPV GLDVQARLQN EELSNDIGAL AHQIDQNALV PYRDFLQRNT DIEQVTFFND
IVQNKWPERY RDSVKPDSLL ILMPAFTLSQ LNEAFKIGLL LFLPFVAIDL IVSNILLAMG
MMMVSPMTLS LPFKLLVFVL VDGWSLVLGQ LVGSYL
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