Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3695 |
Symbol | |
ID | 5384664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4169387 |
End bp | 4169941 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640866719 |
Product | hypothetical protein |
Protein accession | YP_001402649 |
Protein GI | 153948105 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.63687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCAT TGCGTTATGC CGGGCAATAT CTGGATGACG AAACGGGGTT GCACTACACT ACCTACCGGT ATTACGCGCC GGAGGTGGGA AGGTTTATCA CACCCGATCC GATTGGCTTG GCGGGGGGAC TGAATCTTTA TCAGTATGCG CCAAATCCAT TGGGGTGGAT TGATCCATTA GGATTAGCGG GTAATCCTGC AACGGCCACA CATATTACCT ATCAAGGAAT TGATGCTGCT ACAGGTAAGC CTTATGTTGG GTATGCCAGC ATGCAGGGTA ATCAAACCGC ACAAAGTGTT CTTGATTACC GCTATGGTAA TGACTATAGC CGTTTTGGTG GAACTCCTCC TGATATTTTA TTTGATGGCT ATGGGCAAGC AGGTAAGGAT ACAGCTCGAG GCTTAGAGCA AAGAGTATTT GAAAATTCAG GTGGTCTTGA TGGTACGGCA AATGCGCAAA ATCCAGTTGG CAAGGGAAAT GCCAGACGGG CAGAATATCT AAACGCGGCT GATGAACATC TCAATAATAA AGGACGTGGA GGCGGTAAAT GTTAG
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Protein sequence | MQPLRYAGQY LDDETGLHYT TYRYYAPEVG RFITPDPIGL AGGLNLYQYA PNPLGWIDPL GLAGNPATAT HITYQGIDAA TGKPYVGYAS MQGNQTAQSV LDYRYGNDYS RFGGTPPDIL FDGYGQAGKD TARGLEQRVF ENSGGLDGTA NAQNPVGKGN ARRAEYLNAA DEHLNNKGRG GGKC
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