| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3469 |
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| Symbol | |
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| ID | 5384552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3911987 |
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| End bp | 3913366 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640866482 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001402424 |
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| Protein GI | 153947347 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.00699451 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAG ATCACAATTC ATCTCAAGTC GGCTCATCCC AAATCGACTC ATCTCAACAT
CATGTTGATC AACAACATAA TCATAATCGT CGATTGAATA AGCAAGATTA CAAAACACTC
ACCTTAGCCG CATTAGGTGG AGCGTTAGAA TTCTATGATT TTATTATTTT TGTCTTCTTT
GCTGCGGTTA TTGGTGATCT TTTCTTCCCG GCTGATATGC CTGAATGGCT TCGTCAGGTG
CAGACGTTCG GTATTTTTGC TGCGGGTTAC TTGGCTCGCC CATTGGGTGG GATCATCATG
GCACATTTTG GTGATTTGGT TGGGCGTAAA AAGATGTTTA CTCTTAGCAT CTTATTAATG
GCGTTGCCAA CACTGGCTAT TGGCATGTTG CCGACATATG CCACTATCGG GATCACCGCA
CCTTTACTTC TACTATTAAT GCGGGTATTA CAAGGTGCTG CCATTGGTGG CGAAGTTCCC
GGTGCATGGG TCTTTGTGGC AGAACATGTG CCACGTAAAC GTATTGGCAT TGCCTGCGGT
ACCTTAACGG CCGGTCTGAC TGCTGGGATT TTGTTAGGAT CGCTGGTTGC TACAGTCATG
AATACTACGC TGGGCCATCA GGCGATTTTG GAGGGGGGAT GGCGTATACC GTTCTTCTTG
GGCGGAATTT TCGGTTTGTT TGCCATGTAT TTACGCCGTT GGTTGCAGGA AACTCCGATC
TTTAAAGAAA TGCAGGCGCG TAAAACATTG GCTGAAGAAT TGCCGCTAAA ATCGGTGGTG
GTAAACCATA AGAAAGAAGT GGTTGTTTCG ATGCTGCTGA CTTGGTTGCT CTCTGCTGGC
ATCGTCGTCG TTATTTTGAT GACACCAACC TATCTACAGA AGCAGTTTAA TGTACTGCCA
GAGTTGGCAT TGCAGGCAAA CAGTTTGGCG ATTATCGCAT TGGTTATCGG CTGTGTGGTT
GCCGGATTGG CAATTGATCG CTTTGGGGCC AGTAAAACCT TTATCGTTGG CAGCCTGATG
CTGGCGATGT CGACATGGTC GTTCTATCAC ACCAATCTGA CCAATCCAGC TCAGTTATTT
CCCCACTATA TGTTGGCTGG CTTCTGTGTC GGTATCGTTG GTGCCGTGCC TTATGTCATG
GTGCGAGCCT TTCCGGCAGA AGTCCGCTTC ACAGGCATCT CTTTCTCGTA CAATGTTGCT
TATGCCATTT TTGGTGGTTT AACACCTATT CTGGTGACCT TATGGATGAA GTCATCTGCA
ATGGCTCCGG CGTATTACAT GTTGGTACTA TCACTGGTGG GATTGTTATT GGGTATTTAT
CTGCGTAACG ACATTAATAG TGAAGTGAAG GTTCAGATGC CTAAGAGGGT GATTAACTGA
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| Protein sequence | MSQDHNSSQV GSSQIDSSQH HVDQQHNHNR RLNKQDYKTL TLAALGGALE FYDFIIFVFF
AAVIGDLFFP ADMPEWLRQV QTFGIFAAGY LARPLGGIIM AHFGDLVGRK KMFTLSILLM
ALPTLAIGML PTYATIGITA PLLLLLMRVL QGAAIGGEVP GAWVFVAEHV PRKRIGIACG
TLTAGLTAGI LLGSLVATVM NTTLGHQAIL EGGWRIPFFL GGIFGLFAMY LRRWLQETPI
FKEMQARKTL AEELPLKSVV VNHKKEVVVS MLLTWLLSAG IVVVILMTPT YLQKQFNVLP
ELALQANSLA IIALVIGCVV AGLAIDRFGA SKTFIVGSLM LAMSTWSFYH TNLTNPAQLF
PHYMLAGFCV GIVGAVPYVM VRAFPAEVRF TGISFSYNVA YAIFGGLTPI LVTLWMKSSA
MAPAYYMLVL SLVGLLLGIY LRNDINSEVK VQMPKRVIN
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