Gene YpsIP31758_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3187 
Symbol 
ID5386514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3591858 
End bp3592604 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content53% 
IMG OID640866194 
Productamino acid ABC transporter, ATP-binding protein 
Protein accessionYP_001402147 
Protein GI153948888 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTGA TCACCATTAA TCAGGTTCAA AAATACTATG GTAAGAACCA TGTGCTTAAA 
GGCGTGGATT TGGATATCGA GATTGGTGAA GTGATTTCGA TCATTGGTCG CAGTGGCTCG
GGGAAAAGCA CCTTGTTACG GTGCATGAAC GGGCTGGAAG ATTATCAGGA CGGCAGTATT
AAACTGGGCG GAATGACGGT AACCAACCGC GATTCGCAAG CGCGTGAGAT CAGCCGTTCA
GTCGGTATGG TGTTCCAGAA TTTTAATTTA TTCCCCCATA TGACGGCGCT GGAGAATGTG
ATGCTGGCTC CGCGGCGAGT ATTGAAAAAA GGGGCCATCG AGTGTCGTGA ACTGGCGGCA
CAGATGCTGG AGAAGGTCGG GCTGGCAGAT CGGGTCGATT ATTACCCGGC GAATCTGTCT
GGCGGCCAGC AGCAACGGGT CGCGATTGCC CGCGCATTGG CGATGGAACC GAAAGTATTA
CTGTGTGATG AAATTACTTC TGCGCTGGAT CCCGAGCTGG TGGGCGAGGT CTTGAAAGTC
CTTGAGCAGT TAGCCGCGGA GGGCATGACG CTGATCCTGG TCACCCATGA AATGAATTTT
GCCCGTGAAG TCGGTGATCG GGTGGTATTT ATGCATCAAG GGCGGGTGTG GGAGCAGGGC
GAGAGTCGCG CGCTATTTGC CGATCCACAG ACCCGCGAAT TGAAACAGTT TATATCGTCA
GTCCGCGGTT TATCTGGCCC TGCCTGA
 
Protein sequence
MPLITINQVQ KYYGKNHVLK GVDLDIEIGE VISIIGRSGS GKSTLLRCMN GLEDYQDGSI 
KLGGMTVTNR DSQAREISRS VGMVFQNFNL FPHMTALENV MLAPRRVLKK GAIECRELAA
QMLEKVGLAD RVDYYPANLS GGQQQRVAIA RALAMEPKVL LCDEITSALD PELVGEVLKV
LEQLAAEGMT LILVTHEMNF AREVGDRVVF MHQGRVWEQG ESRALFADPQ TRELKQFISS
VRGLSGPA