Gene YpsIP31758_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3028 
Symbol 
ID5385254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3408922 
End bp3409731 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content50% 
IMG OID640866033 
ProductGumN family protein 
Protein accessionYP_001401988 
Protein GI153947061 
COG category[S] Function unknown 
COG ID[COG3735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.842605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAC TCTTACGCCG TATCGCAAAA TTCTTGGGCA TTATTACACC CACCACTTAT 
GCTTACCCGG CTCTGGATAT CACGCTGCCT GGCGAGCGCT ACCTACATTT AGTTGGCAGC
ATTCATATGG GAACGGCAGG GATGTTTCCC CTCCCCCACA CGCTACTGAA TAAATTGAAT
CAGGCTGACG CTCTCATTGT TGAAGCGGAT ATCACCGATG CCACCTCTTC TTTTGGCCAT
AGCACGGTTA CTGAACCTTT AGTCGACAGA TTATCTGAGG AATATTATCC GCAACTCCAG
CAACGCTGCG AAGAGCTGGG GAGTGACCCA CTGGCGATGG CCTATCTCCC GGCATGGCAA
GTCGCTTTAA TGTTGCAGGC GCATCAGGCT CAACGTTTAG GGTTGCGTGG GGAATATGGC
ATTGATTATC AGCTACTGAG AGCCGCGGGT GCACAAGAGA AAGAGATTAT TGAACTGGAA
GGTGCTGAAA TGCAGCTTGA TTTACTCAAA ACCTTACCGG ATAACGGCAT CTCTTTACTG
CACGACACCT TGACCCATTG GCATACTAAT GCCCGCCTGC TACAAACCAT GATTGGCTGG
TGGCTAGAGC ACCATCCTGA AAATAGTCAG GTAACGCTCG CCCCGACTTT CAGCCACGAT
ATGTACGATA TACTGATGCT TCAGCGTAAT AAACGTTGGC AGCAACAGCT CGAACAGCTC
GCCCCCGGAC GTTATGTCGT CGCTGTAGGC GCATTACATT TGTACGGTGA GGGGAATCTT
CCAGAGCTGT TACGAGCAGA CAATCAATAA
 
Protein sequence
MDKLLRRIAK FLGIITPTTY AYPALDITLP GERYLHLVGS IHMGTAGMFP LPHTLLNKLN 
QADALIVEAD ITDATSSFGH STVTEPLVDR LSEEYYPQLQ QRCEELGSDP LAMAYLPAWQ
VALMLQAHQA QRLGLRGEYG IDYQLLRAAG AQEKEIIELE GAEMQLDLLK TLPDNGISLL
HDTLTHWHTN ARLLQTMIGW WLEHHPENSQ VTLAPTFSHD MYDILMLQRN KRWQQQLEQL
APGRYVVAVG ALHLYGEGNL PELLRADNQ