Gene YpsIP31758_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2815 
Symbol 
ID5385585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp3180784 
End bp3181890 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content48% 
IMG OID640865807 
ProductABC transporter, permease protein 
Protein accessionYP_001401778 
Protein GI153947872 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCATC GCCTATACAC ACTGATTATT AAAGAATTGC AGTCGCTGTT ACGCGAGCCA 
CAGACTCGTG CAATATTAAT TTTGCCCGTA ATATTGCAGG TTATCTTGTT CCCGTTCGCC 
GCGACGCTGG AAGTGACGAA TGCCACTATC GCGATTTACA GTGAAGACAG CGGCAAAGCC 
TCGGTAGAGT TGACCCAACG TTTTGCCAAA GCGGCCGCAT TTTCGAATGT GCTGCTCCTG 
CACAGCCCCC ACGAGATCCA ACCGGTTATT GATAATCAAA AAGCCTTGCT GTTGATCCGC 
TTTCCCGCAC AGTTCAGCGC CGATCTGGCC AACGGTAAAA CCACACAGCT CCAGCTCGTT 
CTGGATGGCC GTAATTCCAA CAGTGCGCAG ATCGCGGCGA ATTATATTCA GCAAATCGTG 
CAAAATTACC AGTTGGAATT GACCAGCGGC CAGATCAAAC CCAATAACAG CGAGTTGGTC 
ATCAGGAATT GGTATAACCC GAATCTGGAC TATAAATGGT TCGTAGTACC GTCATTGATT 
GCCATGATCA CCACCATCGG TGTACTGATA GTGACCTCGC TGTCAGTGGC CCGCGAGCGC 
GAGCAAGGGA CGATGGAGCA ATTGTTGGTT TCACCACTGA CAACATGGCA GATTTTTATC 
GGCAAAGCCG TTCCTGCACT GATTGTCGCG ACGTTCCAGG CTTCTATTGT GTTGTTAATT 
GGCATCTTTT TCTACCAGAT CCCTTTCGCC GGTTCGTTGG CTCTGTTTTA CGGCACGATG 
TTGCTTTATG GCTTGTCTCT GGTCGGTTTT GGTCTATTGA TCTCCTCGTT ATGCTCAACT 
CAGCAGCAGG CGTTTATTGG CGTATTTGTC TTTATGATGC CTGCTATTTT GCTTTCTGGT 
TATGTCTCTC CGGTAGAGAA CATGCCAATC TGGCTGCAAA ATATCACTTG GATCAATCCT 
ATTCGTCATT TTACTGACAT CACCAAACAG ATTTATCTCA AGGATGCCAG TTTCGATATT 
ATCTGGCACA GTCTGTGGCC ACTGTTGGTG ATCACTGCCA CTACGGGCAG TGCGGCTTAT 
GGTATGTTTC GACGAAAAAT CGCCTAG
 
Protein sequence
MFHRLYTLII KELQSLLREP QTRAILILPV ILQVILFPFA ATLEVTNATI AIYSEDSGKA 
SVELTQRFAK AAAFSNVLLL HSPHEIQPVI DNQKALLLIR FPAQFSADLA NGKTTQLQLV 
LDGRNSNSAQ IAANYIQQIV QNYQLELTSG QIKPNNSELV IRNWYNPNLD YKWFVVPSLI 
AMITTIGVLI VTSLSVARER EQGTMEQLLV SPLTTWQIFI GKAVPALIVA TFQASIVLLI 
GIFFYQIPFA GSLALFYGTM LLYGLSLVGF GLLISSLCST QQQAFIGVFV FMMPAILLSG 
YVSPVENMPI WLQNITWINP IRHFTDITKQ IYLKDASFDI IWHSLWPLLV ITATTGSAAY 
GMFRRKIA