| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2687 |
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| Symbol | |
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| ID | 5385377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3040391 |
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| End bp | 3041389 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640865677 |
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| Product | putative ribose ABC transporter, permease protein |
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| Protein accession | YP_001401652 |
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| Protein GI | 153947315 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000013058 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGG CAACCGAGAC CCGCCGCGGG GGAGCACCTA CCGCGAGCAA ACTCAACGGC
CAGGCCATGC TGGGCTGGGT TTTACACCAT ATTGTCTGGA TCTGGCTGAT TGCACTGGTT
GTCATCTTTG GTGTCTTCAA TGAATTTTTC CTGACGATAT CCAATCTGCA AAACGTGATG
GTGCAGGCCA CGGTTTTGGG AACCTTAGGG CTGGCGGTGG CACTGCCGCT GCTGGTGGCT
GAGATTGACT TGTCGATTCC GGCAAATGCG GGTTTCTCGG CGGCGGTGGG GGCGCTGGCT
TATGCCGAAC TGGGGCTGCC GTGGCCTATT GCAGCATTAA TAGGTTTACT GGTTGGCACA
TTTATCGGTT TCTTCAATGG GGTGTGCATC ACCCGATTGA AAATGGTCTC GCTGATAGAG
ACGTTGGCGA TGATGATTAT TATCCAGGGC GCGCTGTTGG CGCTGACACA GGGCAAGACC
CTGACAAACC TTTCTGAAGG TTATATTTGG ATTGGCCAGG CGACCATCGG GGGGTGGCCC
CTGATGCCGG TGGTGTTTCT TCTGGTGCTG GCGGTGATGG GGGCGGTGCT GAAGTATACG
GTGTTAGGCC GTTCGATCTA TGCCGTCGGT GGTAATCCTG TTGCGTCAAA CTCCGCCGGG
ATTCGGGTCG CGCGGGTCAA AATTATTGCT TACACGATTT CAGGGTTCCT TGCCGCACTT
GCTGGCTTTT TGTTGGCATC GTGGCAGATG GCCATCACCT CGAACCAAGG CTCGAGCTAC
TTGCTCTACG CCATTGCCGC GCCCATTATC GGCGGCGTCA GTGTTTTTGG TGGGCACGGT
AACGTCAAAG GGGTGCTAGG CGGTGTGCTG CTGCTGACGG TGATCCAAGT TGGCCTCGCC
ATTGTCAATG TCCCTTCGTT CTATGTCGGC ATGATTGGCG GGGTGATCAT TTTTATCGCT
GTCGCCATTG ATGCTTTCCG GATCCGTTAC TTCGGATAG
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| Protein sequence | MDKATETRRG GAPTASKLNG QAMLGWVLHH IVWIWLIALV VIFGVFNEFF LTISNLQNVM
VQATVLGTLG LAVALPLLVA EIDLSIPANA GFSAAVGALA YAELGLPWPI AALIGLLVGT
FIGFFNGVCI TRLKMVSLIE TLAMMIIIQG ALLALTQGKT LTNLSEGYIW IGQATIGGWP
LMPVVFLLVL AVMGAVLKYT VLGRSIYAVG GNPVASNSAG IRVARVKIIA YTISGFLAAL
AGFLLASWQM AITSNQGSSY LLYAIAAPII GGVSVFGGHG NVKGVLGGVL LLTVIQVGLA
IVNVPSFYVG MIGGVIIFIA VAIDAFRIRY FG
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