Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2508 |
Symbol | |
ID | 5384897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2840772 |
End bp | 2841458 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640865498 |
Product | hypothetical protein |
Protein accession | YP_001401476 |
Protein GI | 153949263 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
Num covering plasmid clones | 67 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCTC ACCTAACCGA ACACCCCCCA GTCGGGGATA TTGACGTCCT GTTGCAGGAC ACCTGGCTAC AGGTGATCAG CCTGCGTCAA GGGGTAACCT GTGCCGAGGG CGAAGGGCAG GCATTCTGGC AGCGCTGTGT GGCGGACATT GAACGTGTCC ATCAGGCGCT GAAAGACGCC GGTCACAGCG AGCAGAGTTG CCAGCACATC CGATACGCCC AATGTGCACT GCTGGATGAG ACCGTGAAAG GGCGCGGTGT ACAGGATGAC GCCTACTTCG TGTGGTGCCA TTCGCCCTTA CAGGCGCATT TTTTCAATAC CCTGGATGCC GGGAGCCAGT TGTACGAGCA GATGCGCGCC GTGTTGCGTG AACCTGCGCC GGACAGCGCG GTACTGACCT GTTTTCACCG GGTATTGATG TTGGGCTTCC TCGGCGGGTA CGCCTCCCCG GCGGCTTCTG AACGGGAGCA ACTGATCGAT CAACTGAGCG TGCAGGTACC GGCGTTCAGT GTCGCGCCAT CCGGTGGGAT CCTGGCAAGC GCCGCCTCCC GCAACCGGTT GGGGATCTGG CTGCGTTACT GGCCGGTACG GCTCGGGCTG GCTGCGCTGA TGGTCGCGCT GTTGTGGTGG GGCCTTGATC ACTGGCTGTC CGGTCTGTTA ACCACCTTAC TGCCGGAGCC GGTGTAA
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Protein sequence | MNPHLTEHPP VGDIDVLLQD TWLQVISLRQ GVTCAEGEGQ AFWQRCVADI ERVHQALKDA GHSEQSCQHI RYAQCALLDE TVKGRGVQDD AYFVWCHSPL QAHFFNTLDA GSQLYEQMRA VLREPAPDSA VLTCFHRVLM LGFLGGYASP AASEREQLID QLSVQVPAFS VAPSGGILAS AASRNRLGIW LRYWPVRLGL AALMVALLWW GLDHWLSGLL TTLLPEPV
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