Gene YpsIP31758_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2457 
Symbol 
ID5388243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp2774405 
End bp2775481 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content48% 
IMG OID640865448 
Producthypothetical protein 
Protein accessionYP_001401426 
Protein GI153949078 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCGCTTACCC TATATTGGCT TTGAGCCTAC TCACAGCACT GCCGGTATTT 
GCTGCTGACC CCGTCACATT AGCTCCGGTA CCGGACGCTA TCGCCAACCA TCAAGGTCAG 
ATTAAAATTG CGGTAATCCG TAATTTAGGC TCCGATGACA ACACGACACA ATTCCTGTCC 
GGTGTATTAA AAGAAGGCAA AAAGCTGGGC TTCAAAGTGG ATACGTTTCT GAGTAACGGC 
GACGACGCTC GCTTTCAGGA CTTTGTCAAT CAGGCTATTA GCCAGAAATA CGACGGTATC 
ATTCTTTCTC AGGGCCGCGC CCCCTACTCA ACAGAGTTGG TAAAGCGCAT TACCGATAAT 
GGAATTGCCG TATCGGTATT TGACACTGCT ATTCAGGGCG AGATTCCAGG GCTGACAGTC 
ACTCAACAGG ATGACGCCTC ATTAACCAAT GAATCCTTCG GTCAGTTAAT CAAAGACTTC 
GATGGTAACG CCAATATTAT CAAGCTTTGG GTCGCAGGTT TCCCACCAAT GGAAAGGCGC 
CAAGCCGCTT ATCAAGCATT GCTAAAGCAG AATCCTGGGA TTATTGAACT GGAATCTATC 
GGTGCAGTTT CCTCTGATGT TCAGGGTGAT ACCGCCAATA AAGTCGGCGC GGTATTGGCG 
AAATACCCAA AAGGTAAAAT AGATGCAATC TGGGGAACTT GGGATGCCTT CACACAGGGC 
GCTTATAAAG CCTTACAAGA AAATGGCCGC ACTGAGATAA AACTGTATAG CATTGATATT 
TCGAATCAAG ACTTACAACT TATGCGCGAA GCTAATAGCC CATGGAAAGT CAGTGTTGCG 
GTAGATCCTA AGCTAATTGG CGCCATTAAC CTGCGCCTGA TTGCCAAGAA AATTGCGGGG 
GAAACCACAC CTGCCAGCTA TGAATTCCGC GCGGCTTCCA TTCCTCAGGC ATTGCTAGCC 
AGCCAACCTG GCCCGGTTAA TGTGGCGGGT TTAAGTAAGA TTATCCCCGG TTGGGGTCAG 
TCTGATGATT TCAACTCTCC TTGGTTTGCG ACCCTTGCAG CCCAAAATGG TCAATAG
 
Protein sequence
MKKIAYPILA LSLLTALPVF AADPVTLAPV PDAIANHQGQ IKIAVIRNLG SDDNTTQFLS 
GVLKEGKKLG FKVDTFLSNG DDARFQDFVN QAISQKYDGI ILSQGRAPYS TELVKRITDN 
GIAVSVFDTA IQGEIPGLTV TQQDDASLTN ESFGQLIKDF DGNANIIKLW VAGFPPMERR 
QAAYQALLKQ NPGIIELESI GAVSSDVQGD TANKVGAVLA KYPKGKIDAI WGTWDAFTQG 
AYKALQENGR TEIKLYSIDI SNQDLQLMRE ANSPWKVSVA VDPKLIGAIN LRLIAKKIAG 
ETTPASYEFR AASIPQALLA SQPGPVNVAG LSKIIPGWGQ SDDFNSPWFA TLAAQNGQ