| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2419 |
|---|
| Symbol | |
|---|
| ID | 5384737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 2723884 |
|---|
| End bp | 2724993 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640865410 |
|---|
| Product | NAD dependent epimerase/dehydratase family protein |
|---|
| Protein accession | YP_001401388 |
|---|
| Protein GI | 153950140 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAGA TTTTATTAAC CGGTGCAACA GGTTTTCTAG GCGGAGCTGT ACTAGAAAAA
TTATTGTTGG CAAATTCAGA TTTTAATTAT TTATTACTGG TGCGAGCCAA TACACTAGAA
CAAGGTTTAA TGCGTATTCG CAAGAATCTG GAGAAGTTTT ATCTGCCAAA TGAGCTGATT
AATAAAATAA ATATTAACCA CATATTATTA GGTGACTTGG CTGAGCCGGA TAGTTTTATT
AATGATGTGC GTATTGATGA CGTCACTCAT GTTATTAACT GTGCGGCTAT CGCTTCATTC
GGTAATAATC CGTTGATTTG GAAAGTGAAT GTTGAGGGTA CCTTAGCCTT CGGCAAGAGA
ATGGCACAGG TCGCTGGTTT ACAACGTTTT GTTCATGTTG GAACGGCGAT GGCCTGTACG
CCAGAGGCCG ATACTGTGGT TGATGAACGG GTATTGTCCA CTGAGAATGA TGCTCATTTA
GTGGAATACA CTAAATCCAA ATCAGCTATT GAATGCCTAT TGGCCGAACA CTGCCCAACA
TTACCACTGG TCTTTGCCCG GCCCTCCATT GTTGTTGGGC ATACTCGCTT GGGATGCCAG
CCTTCCAGCA GTATTTTTTG GGTATTTCGC ATGGCATTAA TGCTGCGGAA ATTCATGTGT
TCATTAGATG ACCATATTGA TGTTATTCCC GTTGATTATT GTGCTGATGC GCTGCTTTAT
ATCTTGGAAT ACCCAAATTT ACCGGATAAT ATTTATCATA TTTCTGCTGG AGAAAAAGGC
AGCGTCAGTT TCTCGGAAAT TGATCAGGCG ATGTCAGTAG CTGCCAAACA AAAACCCGTG
GGTGTTAATT ATAGCCAAGT AGAATATACG GCGTTGGTGC AGATGCGTAA TCAACTGAAA
GGTATTTTTG GCCCTTGCAA TGAACGGTTA ATGTTGAAAG CGATGCGGCT ATATGGCTCT
TTTGCCATGT TAAATGTGCG TTTTAGTAAT GAGCGCTTGT TGAGTTTGGG GATGCCGCGC
ACGCCGCGCT TTACCGATTA TATTGCCCGC TGTGTGGAAT CTAGCCACGG GATGACTATC
CAGCAACAAA TGGCTGTCGA TTTTAAATAA
|
|---|
| Protein sequence | MKKILLTGAT GFLGGAVLEK LLLANSDFNY LLLVRANTLE QGLMRIRKNL EKFYLPNELI
NKININHILL GDLAEPDSFI NDVRIDDVTH VINCAAIASF GNNPLIWKVN VEGTLAFGKR
MAQVAGLQRF VHVGTAMACT PEADTVVDER VLSTENDAHL VEYTKSKSAI ECLLAEHCPT
LPLVFARPSI VVGHTRLGCQ PSSSIFWVFR MALMLRKFMC SLDDHIDVIP VDYCADALLY
ILEYPNLPDN IYHISAGEKG SVSFSEIDQA MSVAAKQKPV GVNYSQVEYT ALVQMRNQLK
GIFGPCNERL MLKAMRLYGS FAMLNVRFSN ERLLSLGMPR TPRFTDYIAR CVESSHGMTI
QQQMAVDFK
|
|---|
| |