| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2338 |
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| Symbol | copD |
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| ID | 5385061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2639888 |
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| End bp | 2640772 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640865327 |
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| Product | copper resistance protein D |
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| Protein accession | YP_001401307 |
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| Protein GI | 153949049 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1276] Putative copper export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.30506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTGG CGACTCTATT CATTCTGTGT CGCTTTCTGC ACTTTATGGC AGTGATGCTG
ATGTTTGGCA TCACTGTATT CACCGCCTTT TTGGCACCAG ATCGTTTCTC TTTGATACTA
AAAAAACGCC TGTCACCGTT ACTTGTCTCT AGTACGCTGC TAGGGCTGAT TTCTGCCGTG
GGAATCTTGG CTATTCAGGC TGGAATGATG GGGGATGGCT GGGCAGACAC CTACCGACTG
ACTGTCTGGT GGGCCGTCTT AGGGACGCGA TTTGGTCAGG TATGGCAATG GCACATTGGC
TTGTCCATCT TGAGTATGTG GATCGTGTTG TTGGGTAGCG CGCGAAGGTA TTACTGGCTG
ATGGTCGGCT GCTCTACATT GTTGCTCGCG AGCCTGGCTT TTGCGGGGCA TGCAGCGATG
TATGATGGGG TACTTGGATG GGTTCACCAA ACTAACCAAG TCATCCACCT GCTCAGTGCG
GGGTACTGGC TGGGATGTTT ACTGCCGTTG CTTATTTGCC TTGCATACAC TCGTGATAAG
GGTGCCAAAC GTGAAGCGAT CACGACATTA ATTCGATTTT CGAGCTGGGG GCACTTGGCC
GTTGCCCTCG TGTTGGTCAC TGGGGTAATA AATAGCCTTA TTATGCTGCA AGATGCCACG
CTGACGCTGA CATCAAATTA TCAGATGCTC TTACTGGGCA AAGTCATATT GGTGGTATTT
ATGCTTGCTG TTGCGCTGAT TAACCGTTAC CGCATTGTTC CGATGCTCAA GCAACTGCCC
ACGAAAGCAC ATCATTGGTT AGTTATTAAT AGCTGTTTTG AAATCGTGCT TGGCGTGGCA
GTGCTATTGC TGGTCAGTAT TTTTGCCACA ATGGCGCCAG TATAG
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| Protein sequence | MSLATLFILC RFLHFMAVML MFGITVFTAF LAPDRFSLIL KKRLSPLLVS STLLGLISAV
GILAIQAGMM GDGWADTYRL TVWWAVLGTR FGQVWQWHIG LSILSMWIVL LGSARRYYWL
MVGCSTLLLA SLAFAGHAAM YDGVLGWVHQ TNQVIHLLSA GYWLGCLLPL LICLAYTRDK
GAKREAITTL IRFSSWGHLA VALVLVTGVI NSLIMLQDAT LTLTSNYQML LLGKVILVVF
MLAVALINRY RIVPMLKQLP TKAHHWLVIN SCFEIVLGVA VLLLVSIFAT MAPV
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