Gene YpsIP31758_2327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2327 
SymbolflgM 
ID5387773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2629449 
End bp2629751 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content48% 
IMG OID640865314 
Productanti-sigma28 factor FlgM 
Protein accessionYP_001401296 
Protein GI153947903 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.41233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTA TTGATCGCAC TCAACCGCTA TCGCCAGTAA CACAAGTTCA AGCACGGGAA 
AGCCATGACG TAGCACAACA AACGCGTCAA TCCGCTACCC AGACAAAAAC CCCGGTCAGT
GGTACTGAGG TTAAATTGAG TGATGCGCAG GCAAAATTGA TGCAACCGGG CAGTCAGGAC
ATCAATGTGG AGCGTGTCGA AACATTAAAA CAGGCTATCC GCAGCGGTCA ATTGACTATG
GATACCGGTA AAATAGCCGA TGCCCTGTTA AAAAACGTGG CGGATGAGCT TAAGAATCAT
TAA
 
Protein sequence
MSSIDRTQPL SPVTQVQARE SHDVAQQTRQ SATQTKTPVS GTEVKLSDAQ AKLMQPGSQD 
INVERVETLK QAIRSGQLTM DTGKIADALL KNVADELKNH