Gene YpsIP31758_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2236 
Symbol 
ID5385736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2545238 
End bp2545651 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content45% 
IMG OID640865219 
Producthypothetical protein 
Protein accessionYP_001401205 
Protein GI153947718 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.258479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCGA CTAAAACTAA AATTAGCGCC GCTGTTCTTG GTCTTGTTAT CGCGGGTGTT 
CCAGCATCAA TCATTCTTAG CCAGTTTCTG GATGAAAAAG AAGGCAACAG GCTGACGGCT
TATCTGGACG GAAAGAATAT CTGGACTATT TGCCGTGGCG TCACGCGAGT TGATGGTAAG
CCGGTAATGA AAGGAATGAG GCTGACAGCA GAGAAGTGTA GTGAGGTGAA TAAACTGGAA
GCTGATAATG CACTAGCGTG GGTAATCACG TTCAATCCTC CTCCTGTCTA CGAGTTTGCT
GTGTATCTGT CTGACAATTA TCCTTCCAAT GAAGAATTGG AACAAATCGC TAATTTAAGA
CAAGAAATGC GCGATGAGGG AGTTGATGAA GATAAGCTCC CCATCTCACT GTAA
 
Protein sequence
MASTKTKISA AVLGLVIAGV PASIILSQFL DEKEGNRLTA YLDGKNIWTI CRGVTRVDGK 
PVMKGMRLTA EKCSEVNKLE ADNALAWVIT FNPPPVYEFA VYLSDNYPSN EELEQIANLR
QEMRDEGVDE DKLPISL