Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2236 |
Symbol | |
ID | 5385736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2545238 |
End bp | 2545651 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640865219 |
Product | hypothetical protein |
Protein accession | YP_001401205 |
Protein GI | 153947718 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.258479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCGA CTAAAACTAA AATTAGCGCC GCTGTTCTTG GTCTTGTTAT CGCGGGTGTT CCAGCATCAA TCATTCTTAG CCAGTTTCTG GATGAAAAAG AAGGCAACAG GCTGACGGCT TATCTGGACG GAAAGAATAT CTGGACTATT TGCCGTGGCG TCACGCGAGT TGATGGTAAG CCGGTAATGA AAGGAATGAG GCTGACAGCA GAGAAGTGTA GTGAGGTGAA TAAACTGGAA GCTGATAATG CACTAGCGTG GGTAATCACG TTCAATCCTC CTCCTGTCTA CGAGTTTGCT GTGTATCTGT CTGACAATTA TCCTTCCAAT GAAGAATTGG AACAAATCGC TAATTTAAGA CAAGAAATGC GCGATGAGGG AGTTGATGAA GATAAGCTCC CCATCTCACT GTAA
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Protein sequence | MASTKTKISA AVLGLVIAGV PASIILSQFL DEKEGNRLTA YLDGKNIWTI CRGVTRVDGK PVMKGMRLTA EKCSEVNKLE ADNALAWVIT FNPPPVYEFA VYLSDNYPSN EELEQIANLR QEMRDEGVDE DKLPISL
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