Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2200 |
Symbol | |
ID | 5386051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2520904 |
End bp | 2522103 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640865184 |
Product | hypothetical protein |
Protein accession | YP_001401170 |
Protein GI | 153948534 |
COG category | [S] Function unknown |
COG ID | [COG3299] Uncharacterized homolog of phage Mu protein gp47 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.243728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCA TTAATCGTTA CGGAGTTACT GGCACTACGT TGAGTGAATA TCTGGATACC ATGCGCCAGC ATTATCTTGC TATTGATGAT GGCTGGAATA TTAATCCGGA ATCACCGGAT GGTTTGGCAA TCGCTATTTG GTGTGAGGTA TTAGCCAATT TGGATGAAGC GGTGATTAAT GCCTATCACG CCGCAGATCC CCATTCAGCG ATTGACCAAC AATTAGATCG CATCGCCGCA TTTGCTGGAA TCAAACGCAA AAGTGCGACC TATTCAACCG TGACCGTTAA TTTTCACGGT ATCGCTTTTA CCCCTGTCAG GGCCGGAACA TTAATCAGAA ACAGAGTAAC CAATACTTTA TGGGCGACCG ATGGTGATGT TGTCACCGAC GCGGCAGGTA ATGCGACGGT TAACGCCACT TGTACGTTGG CTGGAGCGCA GGGGGCTAAT AGCGATAACC TGACAATCAT CGCGACCCCC ATCGGCGGTA TTACAGCAGT GACTAATGGC GCGACGGCTT CAATGGGGCT GGATAAAGAA ACCAATAATG CGTTTCGCAT TCGACGCAAT GAGTCAGTCG CGTTACCAGG ATCAAACCAG ATTGATAATA TTTATGCGGC ACTGGTCAAT ATTGAGGATG TTAAACGGGC GCGTATCTAT GAAAACGTTG AGGATCAAGC GGATGAGAAT GGGATATTCG GCCACTCAAT GGCGATATTT GTTGATGGTG GCAGCATTGA GGATGTGATC TGCAGTATCG CAACCAATAA AAGCCCCGGC TGCGGGCTGA ACCGCTACAA CACATTTCCC AATAAAATCT CGTTGGATAC TGTTACACCA AAAGGTAACC CGATCACCGT AACCTTCTTT CGCCCACAAC TGGTACCGGT TTATGCAAAG GTAGAGGTTG TCAGCAATGC TGAATTCATT GACGATGAAA TAAAGCAGGC CATTGTTGAG TACAGCATTA CTGGCTTTGA TCAGACCAAT GGGTTTTCTA AGCTGGGCTT TAAAATTGGT GAAAATATTG GAGCTGGCCG CTTATTTACC CCTGTCAATC ATTTGGTGGC TGGTAATGGC TTTGTCAATG CAATCACTGT AGGCACCACT ATCGAACAGG CCAGCAATAG CGTAGTGAGG ATCGCCTTTA ACCAGTTAGG CATATTTAGT GCCGAAAATA TCGAGGTGGT CTATGTATAA
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Protein sequence | MATINRYGVT GTTLSEYLDT MRQHYLAIDD GWNINPESPD GLAIAIWCEV LANLDEAVIN AYHAADPHSA IDQQLDRIAA FAGIKRKSAT YSTVTVNFHG IAFTPVRAGT LIRNRVTNTL WATDGDVVTD AAGNATVNAT CTLAGAQGAN SDNLTIIATP IGGITAVTNG ATASMGLDKE TNNAFRIRRN ESVALPGSNQ IDNIYAALVN IEDVKRARIY ENVEDQADEN GIFGHSMAIF VDGGSIEDVI CSIATNKSPG CGLNRYNTFP NKISLDTVTP KGNPITVTFF RPQLVPVYAK VEVVSNAEFI DDEIKQAIVE YSITGFDQTN GFSKLGFKIG ENIGAGRLFT PVNHLVAGNG FVNAITVGTT IEQASNSVVR IAFNQLGIFS AENIEVVYV
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