| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2193 |
|---|
| Symbol | |
|---|
| ID | 5385132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 2514667 |
|---|
| End bp | 2515761 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640865177 |
|---|
| Product | late control gene D protein |
|---|
| Protein accession | YP_001401163 |
|---|
| Protein GI | 153950589 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3500] Phage protein D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGCA TTGATACCGG GCATAACGAA CCCGATTATT CTATTTCCGT GGATGGCATA
GATAAAACGG GTGGCATTAA AAAGCGCCTA ATGTCATTGA CGTTAACTGA TAACCGGGGC
TTTGAAGCCG ATCAATTAGA TATTGAGTTT GATGACGCGG ACGGTAAAGT GGAGTTACCG
CGCCGTGGCG CTAAAATAGC GGTATCACTC GGCTGGAAAG GCGCGGCGCT GATCGATAAA
GGTACATTTA CCGTAGATGA AATAGAACAC AGTGGCGCGC CGGATAAGCT GACTGTTCGC
GCTCGCAGTG CGGATTTTCG TGAAACGCTC AATATTCGCC GGGATCAGTC TTACCATAAG
ACCACTATTG GCGGGATAAT TAAAACCGTT GCCGAGCGGA ATAAACTCGC CCCAACATTA
AATAAAACCA TGTTTGATTT GACCATTGAC CATATAGACC AAACCAACGA ATCAGACGGT
AATTTTATTA CCCGACTGGC GAAACAATAT GGCGCTATTG CCGCTGTGAA AAATGGCAAT
CTGTTATTTA TCCGTCAGGG CCAGTCGAAA ACCGCCAGCG GTAAACCGAT CCCGGCCATG
ACTATTATTC GCAGTCTGGG CGACGGCCAT CAGTTTAGTA TGGCTGACCG GGGCGCTTAT
ACCGGCGTTG TCGCCAACTG GCTGAATACC CGCACCGCCG AAAAGCCAGT GGTTAAGGTC
AAGCGAAAAC GCAAACGTAA GGCGACCACT GCCGCCAAGC CCAAAGAGCC CGAAGAGAAA
CAGGGCGAAT ATCTGATCGG TACTGATGAG AATGTGCTGA TCTTACGCAC CACTTACGCC
AGTAAAAACA ATGCACAGCG GGCGGCAAAA TCAAACTGGG AACGGATACA GCGAGGGGTG
GCTAAGTTTT CTATCCAGCT TGCTAAAGGC CGCGCAGATC TCTATCCAGA GGTGCCGGTT
AAAGTTACTG GATTCAAAAA ACAGATTGAT GAAGCAGATT GGACGCTGGT CACGGTGACC
CATTCCGTGA GTGACAGCGG TTTTACTACC GCGCTGGAAT TAGAAGTGAA AATAGATGAT
TTGGATATGG AATGA
|
|---|
| Protein sequence | MISIDTGHNE PDYSISVDGI DKTGGIKKRL MSLTLTDNRG FEADQLDIEF DDADGKVELP
RRGAKIAVSL GWKGAALIDK GTFTVDEIEH SGAPDKLTVR ARSADFRETL NIRRDQSYHK
TTIGGIIKTV AERNKLAPTL NKTMFDLTID HIDQTNESDG NFITRLAKQY GAIAAVKNGN
LLFIRQGQSK TASGKPIPAM TIIRSLGDGH QFSMADRGAY TGVVANWLNT RTAEKPVVKV
KRKRKRKATT AAKPKEPEEK QGEYLIGTDE NVLILRTTYA SKNNAQRAAK SNWERIQRGV
AKFSIQLAKG RADLYPEVPV KVTGFKKQID EADWTLVTVT HSVSDSGFTT ALELEVKIDD
LDME
|
|---|
| |