Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2163 |
Symbol | |
ID | 5385780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2487935 |
End bp | 2488465 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865149 |
Product | fimbrial protein |
Protein accession | YP_001401136 |
Protein GI | 153948801 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CTTTAGTGAC GTTGATGCTA TTTATCCTGC CGGGTATAGC TTTTGCGGAA ACCTCGAACA ATACCATAAA GTTCCAGGGA GAAGTCGCAG AACAGACCTG TATGGTGGAT ATCAATGGTA CCGCCAACAC CCCGGTGGTT CTGCTGCCGA CTGTCTCGAC CAGTAACCTT AATCAAGTCA ACTCGGTGGC GGGAAAGACC AACTTTACGA TCAATCTAAC AGGCTGCAAT ATTGCGATTC AAGATACCCA AATCAGCTCT GTTTTTCAGG GGATGAATGT CACGTCTGGC GGAAACCTGG GCAATATTGG CACAGCAAGA AATGTTGCCA TTCAATTAAT TGATCCCCGT GGCACCCCGA TTCGTATGTC TGGTGGCAGT GTGGAAGTTC CGGGAATTAC CTTGGCGACT GGCGCAACCT CAGCATCACA GGATCTGTCG GCACAATATA TAACGGAAGA AGGCCAGGCA ACCGCAGGCA GTGTTATTGC CTCTGCACAG TATGCGATCA CCTACCCCTA A
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Protein sequence | MKKTLVTLML FILPGIAFAE TSNNTIKFQG EVAEQTCMVD INGTANTPVV LLPTVSTSNL NQVNSVAGKT NFTINLTGCN IAIQDTQISS VFQGMNVTSG GNLGNIGTAR NVAIQLIDPR GTPIRMSGGS VEVPGITLAT GATSASQDLS AQYITEEGQA TAGSVIASAQ YAITYP
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