Gene YpsIP31758_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2156 
Symbol 
ID5387750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2479340 
End bp2480182 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content53% 
IMG OID640865142 
ProductHpcH/HpaI aldolase/citrate lyase family protein 
Protein accessionYP_001401129 
Protein GI153948906 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.928394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATC TTGATACTTA CCAAACCCGC AGTTGGCTCT TTACGCCAGC CACTCGCTCG 
GATCGCTTTG CTAAAGCGGC TGAAAACGGT GCAGATGTCG CCATTATTGA TCTTGAAGAT
TCGGTCTCTC AAGCGGATAA GGAGCAGGCC CGACAAAAAG CCATCTCTTA TCTCTCTTCA
CGTCCGGCTA CATCACTACC GCTGGCACTA CGGATCAACG GACTGGATAC TCGTGCCGGT
ATTGAGGATA TTCACGCCTT GCTCGAATGT GGCAGCCTTC CCGATTACCT AGTCCTTCCT
AAAACGGAGT CAGCGGCTCA TCTGCAGATT CTGGAACGCC TAATGATGTT CGCAGGCTCT
GATACGCGCC TTATCGGCAT CATTGAATCT GTACGTGGTC TCAACGCTGT TGAGTCTATT
GCTGCTGCCA CCCCAAAATT GGCCGGATTG ATATTTGGTG CTGCGGATAT GGCCGCCGAT
ATTGGCGCAG CATCCACCTG GGAACCGCTA GCGCTGGCGC GTGCCCGGTT AGTCTCCGCC
TGTGCGATGA ATGGCATTCC CGCTATTGAT GCCCCTTTTT TTGATGTCCA CGATGTTTCA
GGCCTACAGT CTGAGACCCT TCGCGCATCT GATTTCGGCT TTTCTGCAAA AGCGGCCATT
CATCCCGCAC AAATCAGCAC AATCAATACC TTATTTACCC CCACTGCAGC AGAGATACGC
CATGCCCGCG CAGTGCTCGC CGAGAATACC AAAGGGGTCG GGACCGTCAA CGGAATGATG
ATCGATGAGG CTGTTGCACG TCAGGCCCGC CGGGTACTTA CCCGAGCGGG TATCTCTGCC
TGA
 
Protein sequence
MSNLDTYQTR SWLFTPATRS DRFAKAAENG ADVAIIDLED SVSQADKEQA RQKAISYLSS 
RPATSLPLAL RINGLDTRAG IEDIHALLEC GSLPDYLVLP KTESAAHLQI LERLMMFAGS
DTRLIGIIES VRGLNAVESI AAATPKLAGL IFGAADMAAD IGAASTWEPL ALARARLVSA
CAMNGIPAID APFFDVHDVS GLQSETLRAS DFGFSAKAAI HPAQISTINT LFTPTAAEIR
HARAVLAENT KGVGTVNGMM IDEAVARQAR RVLTRAGISA