Gene YpsIP31758_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2005 
Symbol 
ID5386530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2310216 
End bp2311388 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content55% 
IMG OID640864989 
Productmajor facilitator transporter 
Protein accessionYP_001400978 
Protein GI153950371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.065805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAAAA CTTCATCACT GTTTCTCCTG TTTGGCACGT TGTTCAGCGC AGGAGGCTAT 
GGTGCCACAT TTCTCATTTC TGCTTGGTTT CACTCGCAGG GGGGCAACGA CATTGACGCT
GGGGCAACCC TCGGTATGGC TCTGTTCGGG ACACTCATCG GTGTGCCTTT GGTTGGCTGG
TTTGCTGGAA AATTGGACGC CTCACGTCTG GCGGCGCTGG CAGCACTGAT CCAGTCCTGT
GGCTACTTTC TACTGGGGAG CCTCAGTGGC GGATCCGGCT ATCTGCCCCA TGTAGCGGCA
CTGTTGATTG GCCTGGGCTG GGGCATGTTC TATATCGGGG GGCCAATGGC GCTGTCTGAA
CGCCTCACCG ATACCGAACG AGGCCCTGGT TTTACACGCT TCAGTGCATT CCAGATGACC
GGAATTTGCG GTAGCCCTAT CCTGCTGACT ATCGCGGTGG TACAAGGAGG GATCCCCATC
CAGGCCGCAT TTCTGTTGGT GGGCGTGATG GGAGTCTTCG CCTCTATCCT GTTGATGATT
TTTGGCACCC GAGAGCCACT TATCCGGCAT GAGAATTCAC TGCGGCCTTG GGTAAAAAAA
ATTACCGTAC TCGCCAAAAG CGGAGTCATC AGACCCATCG TGATGGTCTG TCTAGGGGGG
GCCGTTTTTT CTGGAATGAT GTCGTTTCAG GACTCGCTCA CCGACGGTTC ATTGGCCAGC
GCCAGTACTT TTTTTGCCGT GCATGCCACT ACCGCCGTGG TTTCACGCCT GTTACTTGCA
CACAAACTAT CAAGCTGGCC CCGTACCCCA CTCGTAGCGG TACTCTTGTG TTGCCTAATG
ATCGGCCTTG TGTGCCTGTT AGGAATACCG ACGCATGTGA GTTTCCAGAT CGCTGCCGCC
ATGCTAACCG GCGCTGGCTA CGGTCTGTTA TACCCCGTGA TTCAAACTTG GGCGGTCAAT
GAATCAGCCC CTGAAAACCG TCACGCCGCT CTGACTTGGT TTGTCGTTGC CTACTTCGTG
GGTATTTTTG GTTTTCCGCC TTTTGGGGGC TGGGTACTGG TGACAGTAGG CAAGGTTTGG
TTTATCTGGG TGCTGGCTAC GTTGGCCACA TTAGAGTTAG TGACAGCGAT AGTGAAGTGG
CCGCAAACCA CTCACCGCCC GCTATCATCA TAG
 
Protein sequence
MRKTSSLFLL FGTLFSAGGY GATFLISAWF HSQGGNDIDA GATLGMALFG TLIGVPLVGW 
FAGKLDASRL AALAALIQSC GYFLLGSLSG GSGYLPHVAA LLIGLGWGMF YIGGPMALSE
RLTDTERGPG FTRFSAFQMT GICGSPILLT IAVVQGGIPI QAAFLLVGVM GVFASILLMI
FGTREPLIRH ENSLRPWVKK ITVLAKSGVI RPIVMVCLGG AVFSGMMSFQ DSLTDGSLAS
ASTFFAVHAT TAVVSRLLLA HKLSSWPRTP LVAVLLCCLM IGLVCLLGIP THVSFQIAAA
MLTGAGYGLL YPVIQTWAVN ESAPENRHAA LTWFVVAYFV GIFGFPPFGG WVLVTVGKVW
FIWVLATLAT LELVTAIVKW PQTTHRPLSS