Gene YpsIP31758_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1969 
Symbol 
ID5384895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2271631 
End bp2272647 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content44% 
IMG OID640864953 
Productresponse regulator of RpoS 
Protein accessionYP_001400944 
Protein GI153948979 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.313928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAC CACTAGCAGG TAAAAATATT TTAGTTGTCG AGGATGAAGT CGTATTCCGT 
ACCGTCTTGG CGGAATACCT CGGCTCACTT GGCGCGACAA TCCATCAGGC CGAAAATGGG 
CTGGCGGCTT TATATCAGCT AAAAGGTCAC TCTCCTGACT TGATCCTTTG CGATCTGGCT 
ATGCCGAAGA TGGGGGGGAT TGAGTTTGTT GAGCAGTTAC TACTGAAAGG GATAAAGATC 
CCTGTATTAG TGATCTCTGC AACTGACAAG ATGGCGGATA TTGCTCAGGT ATTACGCTTA 
GGCGTAAAAG ATGTGCTATT GAAACCTATC GTGGATTTGA ATCGTTTACG TGAAGCTGTA 
TTGGCCTGCT TGTATCCCAC ATTATTTACT TCCCATGCTA TTGAGGAAAC AGAGCTCATT 
CAGGATTGGG AGGCTTTACG CAAAAATCCA AGTGATGTCG TACAATTGTT AAAACAGTTA 
CAGCCTCCAG CGCAACAAAC CCTTGCTCAT TGTCGGATAA ATTATCGCCA GCTTACCATG 
GTAGAAAAAC CAGGGTTGGT ACTCGATATT GCAGCGTTAT CCGATAAGGA TTTAGCTTTC 
TATTGTTTGG ATGTCACCCG TGCGGGTGAT AATGGGGTTT TAGCCGCATT ATTATTACGT 
GTACTATTTA ATGGCATCTT ACAAGAACAT TTAACACACC AACAGCAACG TTTACCACAG 
ATGTCATCTT TACTTAAGCA GGTCAATCTA CTATTAAGAC GTACGCACCT TGATGGACAG 
TTTCCTTTAT TAGTTGGTTA TTACCATGTT GAGTATCAGA ATTTAATTTT GGTTTCAGCC 
GGTTTGCATG CAAATATCAG CGCGGGTAAA AACCAGATTC AGCTTAACAA TGGTGTCCCT 
TTAGGGACCT TAAAAACAGC ACACTTAAAC CAGGTCAGTC AGCGCTGTGA AGCATGGCAG 
TGTCAGGTAT GGGGCGGAGG GAGCCGTTTA AGGCTGATGC TTGCTGCTGA AGAATAG
 
Protein sequence
MEKPLAGKNI LVVEDEVVFR TVLAEYLGSL GATIHQAENG LAALYQLKGH SPDLILCDLA 
MPKMGGIEFV EQLLLKGIKI PVLVISATDK MADIAQVLRL GVKDVLLKPI VDLNRLREAV 
LACLYPTLFT SHAIEETELI QDWEALRKNP SDVVQLLKQL QPPAQQTLAH CRINYRQLTM 
VEKPGLVLDI AALSDKDLAF YCLDVTRAGD NGVLAALLLR VLFNGILQEH LTHQQQRLPQ 
MSSLLKQVNL LLRRTHLDGQ FPLLVGYYHV EYQNLILVSA GLHANISAGK NQIQLNNGVP 
LGTLKTAHLN QVSQRCEAWQ CQVWGGGSRL RLMLAAEE