Gene YpsIP31758_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1816 
Symbol 
ID5388402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2100921 
End bp2101292 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content46% 
IMG OID640864800 
Producthypothetical protein 
Protein accessionYP_001400791 
Protein GI153949597 
COG category[S] Function unknown 
COG ID[COG4679] Phage-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.338143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAGTT TGATACCGTT TTTCACGGAG CAGGGACGGC TTATGTATAA GATTAGTTTG 
TTACGGTTGG CACAGAGGGA GTTAGTAAGA TTACCCGTAG GCATACAGGC GGTACTGATT
AAGGCGATGG ATGAGCTTGA AGCTTGTGGT CATGAACTGA GAGAGCCTTA TGTACGGGAT
ATGGGGCAGG GGTTAAAAGA ATTACGCGTA AGCGCTAAAG AAGGTATCGG GCGTGGTTTT
TTCTTTTGCC ACCTCCATCG GCAGGTTTAT ATCATTCACC TCCTACAGAA AAAAACACAG
AAAACCCCAA GACGGACACT GATATTGGCT TATCGGCGCA TGAAAGAACT CAAACGGAGA
TTGCAGTCAT GA
 
Protein sequence
MVSLIPFFTE QGRLMYKISL LRLAQRELVR LPVGIQAVLI KAMDELEACG HELREPYVRD 
MGQGLKELRV SAKEGIGRGF FFCHLHRQVY IIHLLQKKTQ KTPRRTLILA YRRMKELKRR
LQS