Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1816 |
Symbol | |
ID | 5388402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2100921 |
End bp | 2101292 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640864800 |
Product | hypothetical protein |
Protein accession | YP_001400791 |
Protein GI | 153949597 |
COG category | [S] Function unknown |
COG ID | [COG4679] Phage-related protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.338143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGAGTT TGATACCGTT TTTCACGGAG CAGGGACGGC TTATGTATAA GATTAGTTTG TTACGGTTGG CACAGAGGGA GTTAGTAAGA TTACCCGTAG GCATACAGGC GGTACTGATT AAGGCGATGG ATGAGCTTGA AGCTTGTGGT CATGAACTGA GAGAGCCTTA TGTACGGGAT ATGGGGCAGG GGTTAAAAGA ATTACGCGTA AGCGCTAAAG AAGGTATCGG GCGTGGTTTT TTCTTTTGCC ACCTCCATCG GCAGGTTTAT ATCATTCACC TCCTACAGAA AAAAACACAG AAAACCCCAA GACGGACACT GATATTGGCT TATCGGCGCA TGAAAGAACT CAAACGGAGA TTGCAGTCAT GA
|
Protein sequence | MVSLIPFFTE QGRLMYKISL LRLAQRELVR LPVGIQAVLI KAMDELEACG HELREPYVRD MGQGLKELRV SAKEGIGRGF FFCHLHRQVY IIHLLQKKTQ KTPRRTLILA YRRMKELKRR LQS
|
| |