| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1546 |
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| Symbol | ypsI |
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| ID | 5385687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1802459 |
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| End bp | 1803103 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640864529 |
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| Product | N-acylhomoserine lactone synthase YpsI |
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| Protein accession | YP_001400525 |
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| Protein GI | 153949171 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAAAG TATTTAACGT AAACTTTGAC AGAATGTCAG AGAATAAATT AGATGAGATC
TTTACACTTA GAAAAATAAC ATTTAAAGAT CGTTTGGACT GGAAAGTAAC CTGTATTGAT
GGCAAGGAAA GTGATCAATA TGATGATGAG AATACAAATT ACTTATTAGG CACTATAGAC
GATACTCTCG TTTGCAGTGT TCGTTTTGTT GAAATGCAGT ATCCAACCAT GATTACGGGG
CCTTTTGCTC CTTACTTCCG TGATCTGGAT TTACCTATTG ATGGATTTAT TGAGTCGAGC
CGCTTTTTTG TCGAAAAAGC GTTAGCTCGG GATAAATTAG GTAATAATGG TTCTCTCAGT
GCAATACTTT TTCTCTCTAT GGTCAATTAC GCCAGAAACT GTGGATACAA AGGTATATTG
ACTGTTGTTA GCAGAGGTAT GTATACAATA CTGAAACGCT CTGGGTGGGG TATTACTGTT
ATTAATCAAG GTGAATCGGA GAAAAATGAA GTTATCTATC TTTTACACTT GAGCATTGAC
AGTAATAGCC AACAGCAGTT GATCAGGAAA ATACAACGAG TGCACAATAT TGATACTCAT
ACACTTGAAA GCTGGCCGCT TGTTGTGCCC AGTATGACTA AATAG
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| Protein sequence | MLKVFNVNFD RMSENKLDEI FTLRKITFKD RLDWKVTCID GKESDQYDDE NTNYLLGTID
DTLVCSVRFV EMQYPTMITG PFAPYFRDLD LPIDGFIESS RFFVEKALAR DKLGNNGSLS
AILFLSMVNY ARNCGYKGIL TVVSRGMYTI LKRSGWGITV INQGESEKNE VIYLLHLSID
SNSQQQLIRK IQRVHNIDTH TLESWPLVVP SMTK
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