| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1536 |
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| Symbol | |
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| ID | 5387819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1789530 |
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| End bp | 1792817 |
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| Gene Length | 3288 bp |
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| Protein Length | 1095 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640864518 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_001400514 |
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| Protein GI | 153947144 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR02562] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTT TACTGATATC CCAATGCCAT AAACGGGCGC TTGATGAAAC ACGCCGTATT
TTGGATCAGT TTGCTGAACG TAAAGGTGAT CGGACATGGC AGACGGCAAT AACGCAGGAA
GGGCTAAATA CATTACGTAA ATTATTGCGT AGAACGGCGC GGCGTAATAG TGCGGTGGCC
TGCCATTGGA TCAAAAGTAA TAACCAAAGC GAGTTGTTAT GGATTGTTGG GAATTTAAGG
CGTTTCAATG CTGAGGGAAC CGTGCCAACC AATACTACGC AACGGAATAT CTTGCGCAGC
CAGGATGAAA ATAACTGGCA CAGCGTGGAG ACCATTGCAC TGCTGGCCGG TATCGCTGGG
TTATTTCATG ATTTTGGTAA GGCCAATGTA TTATTTCAAC AAGGGTTGCA AGGGCAGGGG
AAAACATATC AACCCTATCG GCATGAGTGG GTTTCATTAC GTTTATTTCA AGCTTTTGTT
GAACAGAAAA ATGATATTCA ATGGCTCACA GCCTTAAGCC AAATTAATCC CGCTGACGAA
ACCGCTTTAA TGTCCAATTT GGTTAAAGAT GGGCTAGACG ACTATACCAA TCCCCTCGCT
GCATTACCTC CTCTTGCTAA GACTATTGCG TGGTTGATCC TTTCACACCA TCGCTTACCC
GTGTATCCCT CCAAGGATTA CCATAGGCCC CCTAAAGTAG AGGAAATAGA TGATTGGTTG
CACCAGCAGC TTATGCCGGT ATGGAATTCG ACCAATATGG ACAGCGGTGA CTGGCGTGAA
AAAGATAAGC TAGATGTATG GCGCTTCCCG CATGGCACGC CACTACAAAG TGCCGAATGG
TGTAAAAAGG CACAAAAGTT TGCCAAACGC GCTTTGCGAC AACCGTCATT GGTTAATGAT
GGTCACTTGA ACCAGCGTTT TACCAGCCAT ATGGCGCGTC TGGCGTTAAT GCTGGCCGAT
CATCATTATT CTTCATTACC GGCCACTCCC GGCTGGCAGG ATAAAAACTA TCAAGTATTT
GCAAATACCC ACAATAAAAT GAGGGATGCG AATGCCCACA GTAAAACGAT TGAAATGAAG
CAGCGGCTGG ATGAACATAA TATTGGTGTG GGGCAGAACG CGCTGTTGCT TGGCCGCAGC
TTGCCACATA TCCGCAAAAC CTTACCAGCA ATCACTCGCC ATAAAGGATT TAAACAACGT
TCGGTTCAGG AAAAGTATCG TTGGCAAGAT AAAGCCTTTG ATCTGGCTGT CACGCTGCGC
GAGCGTTCTC TGCAGCAAGG TTTTTTCGGC GTCAATATGG CCTCAACCGG GTGCGGTAAA
ACCTTTGCAA ATGCCCGGAT AATGTATGGT TTGTCCGATG AAAAACAGGG ATGCCGCTTT
TCTGTTGCTT TGGGCCTACG CACCTTAACC TTGCAGACCG GTACCGCATT GCAGCAGAAG
TTAACCTTAC AAAAGGACGA TTTGGCCGTC TTGATTGGTT CTCAATCGGT CTTGCAATTA
TATCAATTAA ATAACGATAA ATTGGAACCT GGTGGAACCG GCAGTCAGTC GGCGGATAAG
TTTTTTTCCG AGCATCAGTA TGTCAGTTAT GACGGCAGTT TGGATGATGG GCGGCTGAGC
ACTTGGTTAA GTAATAACGA TAGATTAAAG CGTTTGCTCT GTGCGCCAGT ACTGGTCTGC
ACCATTGACC ACCTGATACC TGCTACCGAG AGCCTACGGG GTGGCAAGCA GATAGCCCCC
ATGCTGCGTT TGCTAACCTC CGATTTAGTC TTGGATGAAC CGGATGATTT TGATCGCAAT
GACTTGCCCG CGCTATGCCG CTTGGTGAAT TGGGCGGGCA TGTTAGGTTC CCGCGTTCTG
CTTTCGTCAG CCACATTGCC GCCAGCATTA GTACAAGCGT TGTTCAATGC TTATCGTGCG
GGGCGGGCTG ATTATCAACA AGCCTGCGGG CAACCGGATA CTCCGGTTAA TGTTTGCTGT
GCCTGGTTTG ATGAACATGG CGTTGCACAG CAAGATATCC AGCAGTCAAA AGATTTTATC
CAACATCATG GCGATTTTAT CACTCGCCGA GTGGGGAAAC TGTCTACGGC AGAGGTGCTG
CGCAGAGCCG AGTTAATACC GGTCAGCTCT GCCAGTGTGA AGAAAGGCTC GGTGCTAGAT
GCTATGGCGG CGGTGATGCG CGATTCTATG CTGCGCTTAC ATCAGGCACA TCATCAAACT
CACCCTTCTG AGAAAATCGT TTCAGTGGGT GTGGTCAGGA TGGCCAATAT TGATCCGCTG
GTGGCGATTG CCCAGCGCTT ATACGCGATG GCCGCGCCAG AAAATTACCG TATTCATTAC
TGTGTCTATC ATAGTCAGCA TCCGCTAGCG GTGCGTTCTG CTATTGAACG GCGGTTGGAT
GTGACGTTAA CTCGCTATCA GCCTAATGCA CTTTGGCAGG TAGCCGAAAT TGAACATGCA
CTACAGCACC ATCCGGAGCA GCATCACCTG TTTGTGGTGC TCGCCACCTC GGTGGTTGAA
GTGGGCAGGG ACCATGACTA CGATTGGGCG CTAGCCGAAC CCAGCTCTAT GCGCTCGTTT
ATCCAGTTGG CAGGGCGTGT ACAACGGCAC CGGCAAGTCG CGCCGCAGAT GGCGAATATG
CATATTCTGC AAAAGAATTT TAAGGCACTG ACTCAAAAAA ATCCGGCGAT CCCCGTTTAT
TGCCAACCCG GTTTTGAGAC CACCCGTTGT CGGCTGAACA CCCATGATCT GGATAAGCTG
CTCTTACCCT CACAATATAA AGTGATTAAT GCCATCAGCC GTATTCAAGA AAGAACCAAA
CTCGAACCTC GAGATAATTT TGTTGATTTA GAACATCTTA GCTTGAGGTT GATATTGCAG
GGTAGCGCTG AACCGTTGAA GTATTATGCC GCATTATGGT GGCGTAAACA GGCGACTTGG
AGTGGGGAGC AGCAACGGTG TACCCCTTTC CGACAATCCA GCCCTGATGA ACAGCATAAT
CTGTGGATTG ACGATGAAGC GGATAAACCG GTGTTTAAAC GTCTTGATAG CGACCAGATT
GAGTGGAAAG TCAGTGATGG GTTTCAGGAC GTTGAACTGA CACTGGCAGT AGGAAACAGT
GCATGGATAG ACACCGATTG TCTGCGGATT TATCAGTGGC TGGCAGAGTC ATTAAATAAG
GAATTAAACG AGGTTAGCCG GCAATTTGGT GAGGTCCGCC TGCCCAAAAA AGATGGCGAG
AGGTGGCATT ATCATCCGCT ATTAGGGGTG TTTGGCGCAC TCGATTGA
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| Protein sequence | MNILLISQCH KRALDETRRI LDQFAERKGD RTWQTAITQE GLNTLRKLLR RTARRNSAVA
CHWIKSNNQS ELLWIVGNLR RFNAEGTVPT NTTQRNILRS QDENNWHSVE TIALLAGIAG
LFHDFGKANV LFQQGLQGQG KTYQPYRHEW VSLRLFQAFV EQKNDIQWLT ALSQINPADE
TALMSNLVKD GLDDYTNPLA ALPPLAKTIA WLILSHHRLP VYPSKDYHRP PKVEEIDDWL
HQQLMPVWNS TNMDSGDWRE KDKLDVWRFP HGTPLQSAEW CKKAQKFAKR ALRQPSLVND
GHLNQRFTSH MARLALMLAD HHYSSLPATP GWQDKNYQVF ANTHNKMRDA NAHSKTIEMK
QRLDEHNIGV GQNALLLGRS LPHIRKTLPA ITRHKGFKQR SVQEKYRWQD KAFDLAVTLR
ERSLQQGFFG VNMASTGCGK TFANARIMYG LSDEKQGCRF SVALGLRTLT LQTGTALQQK
LTLQKDDLAV LIGSQSVLQL YQLNNDKLEP GGTGSQSADK FFSEHQYVSY DGSLDDGRLS
TWLSNNDRLK RLLCAPVLVC TIDHLIPATE SLRGGKQIAP MLRLLTSDLV LDEPDDFDRN
DLPALCRLVN WAGMLGSRVL LSSATLPPAL VQALFNAYRA GRADYQQACG QPDTPVNVCC
AWFDEHGVAQ QDIQQSKDFI QHHGDFITRR VGKLSTAEVL RRAELIPVSS ASVKKGSVLD
AMAAVMRDSM LRLHQAHHQT HPSEKIVSVG VVRMANIDPL VAIAQRLYAM AAPENYRIHY
CVYHSQHPLA VRSAIERRLD VTLTRYQPNA LWQVAEIEHA LQHHPEQHHL FVVLATSVVE
VGRDHDYDWA LAEPSSMRSF IQLAGRVQRH RQVAPQMANM HILQKNFKAL TQKNPAIPVY
CQPGFETTRC RLNTHDLDKL LLPSQYKVIN AISRIQERTK LEPRDNFVDL EHLSLRLILQ
GSAEPLKYYA ALWWRKQATW SGEQQRCTPF RQSSPDEQHN LWIDDEADKP VFKRLDSDQI
EWKVSDGFQD VELTLAVGNS AWIDTDCLRI YQWLAESLNK ELNEVSRQFG EVRLPKKDGE
RWHYHPLLGV FGALD
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