Gene YpsIP31758_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1436 
Symbol 
ID5387672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1675381 
End bp1675929 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content52% 
IMG OID640864419 
ProductNUDIX family hydrolase 
Protein accessionYP_001400415 
Protein GI153947441 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000974563 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGAGC AAAATCCAGC AGCAGTCATC GAGTGGGTTG ACATTGTTGA TGAGCAAAAT 
AACGTCATTG CTCAGTCCAG TCGTCAGCAA ATGAGAGCTC AGCGACTACG CCATCGTGCT
ACCTATATTG TGGTGCACGA TGGAATGGGG AAAATTCTGG TACAACGCCG TACTGAGAGC
AAAGATTTTC ATCCCGGCAA ACTGGATGCC ACGGCGGGGG GCGTTGTGCA AAGTGGCGAG
AACTACCTTG AATCCGCCCG GCGCGAGGCT GAAGAAGAAT TGGGGATCGC CGGTGTGCCG
TTCGCGGAAC ACGGCCAATT CTATTTTGAA GAAGAGTGCT GCCGAGTATG GGGGGCGTTA
TTCAGTTGTG TGTCTCATGG CCCCTTTGCG TTACAACCAG AGGAAATTGA TGAAGTATGC
TGGATGGTGC CAGAAGAGAT CACCGCCCGC TGTGACGAAT TTACACCTGA TTCGCTCAAA
GCATTATCAC TGTGGCTGAC GCGCAACAAC GAACAGGATT ACGGCAAAAT CACTCCCCGC
GAAGCGTAA
 
Protein sequence
MVEQNPAAVI EWVDIVDEQN NVIAQSSRQQ MRAQRLRHRA TYIVVHDGMG KILVQRRTES 
KDFHPGKLDA TAGGVVQSGE NYLESARREA EEELGIAGVP FAEHGQFYFE EECCRVWGAL
FSCVSHGPFA LQPEEIDEVC WMVPEEITAR CDEFTPDSLK ALSLWLTRNN EQDYGKITPR
EA